myRT

myRT report for GCA_001647465.1_ASM164746v1

Download annotations/find similar RTs

Seq: LQQE01000015.1 Klebsiella pneumoniae strain 105371 LT23_contig000015, whole genome shotgun sequence (479152 bp)
Overview 1 RT 1: 450570-453644 bp Neighborhood of RT #1 [450570, 453649] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 450570-450788 bp Ori: OAA07485.1 Feature: domain Description: PRK09678 Location: 450573-450771 bp Feature: domain Description: PRK09678 Location: 450573-450771 bp Feature: gene Location: 451050-451223 bp Feature: gene Location: 451192-451965 bp Ori: OAA07487.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 451327-451780 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 451 327-451 780 bp Feature: gene Location: 452580-453062 bp Ori: OAA07488.1 Gene: smpB Feature: domain Description: SmpB Location: 452610-453054 bp Feature: domain Description: SmpB Location: 45261 0-453054 bp Feature: gene Location: 453212-453649 bp Ori: OAA07489.1 Gene: ratA Feature: domain Description: PRK10724 Location: 453215-453644 bp Feature: domain Description: PRK1 0724 Location: 45321 5-453644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: LQQE01000042.1 Klebsiella pneumoniae strain 105371 LT23_contig000042, whole genome shotgun sequence (26247 bp)
Overview 1 RT 1: 13403-19344 bp Neighborhood of RT #1 [13403, 19344] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 13403-14674 bp Ori: OAA05413.1 Gene: dinB_4 Feature: domain Description: umuC Location: 13406-14666 bp Feature: domain Description: umuC Location: 13406-14666 bp Feature: gene Location: 14674-15105 bp Ori: OAA05414.1 Gene: lexA_4 Feature: domain Description: PRK10276 Location: 14725-15088 bp Feature: domain Description: PRK102 76 Location: 1472 5-15088 bp Feature: gene Location: 15511-16998 bp Ori: OAA05415.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15916-16606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15916-16606 bp Feature: gene Location: 17468-18433 bp Ori: OAA05416.1 Gene: traC Feature: domain Description: ArdC Location: 17594-18428 bp Feature: domain Description: ArdC Location: 17594-1842 8 bp Feature: gene Location: 18913-19344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)