myRT

myRT report for GCA_001648575.1_ASM164857v1

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Seq: LQXN01000043.1 Bacillus horikoshii DSM 8719 Cont78, whole genome shotgun sequence (20092 bp)
Overview 1 RT 1: 17815-19721 bp Neighborhood of RT #1 [17815, 19741] RVT-GII Feature: gene Location: 17815-18075 bp Feature: gene Location: 18159-18479 bp Feature: gene Location: 19052-19741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19247-19721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9247-1 9721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LQXN01000050.1 Bacillus horikoshii DSM 8719 Cont85, whole genome shotgun sequence (41347 bp)
Overview 1 RT 1: 1-3238 bp Neighborhood of RT #1 [1, 3238] GIIM RVT-GII GIIM Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like Feature: gene Location: 1-258 bp Feature: domain Description: GIIM Note: maturase Location: 10-166 bp Feature: domain Description: GIIM Note: maturase Location: 10-166 bp Feature: gene Location: 358-951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361-463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361-463 bp Feature: domain Description: GIIM Note: maturase Location: 514-748 bp Feature: domain Description: GIIM Note: maturase Location: 514-748 bp Feature: gene Location: 1353-2489 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1386-1506 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1386-1506 bp Feature: domain Description: Phage_int_SAM_3 Location: 1554-1710 bp Feature: domain Description: Phage_int_SAM_3 Location: 1554-1710 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1884-2418 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1884-2 418 bp Feature: gene Location: 3104-3238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189)

Seq: LQXN01000062.1 Bacillus horikoshii DSM 8719 Cont97, whole genome shotgun sequence (301533 bp)
Overview 1 RT 1: 179331-186923 bp Neighborhood of RT #1 [179331, 186925] PA_CoA_Oxy1 PA_CoA_ligase RVT-GII GIIM RVT-GII GIIM RVT-GII thiol_BshB2 DUF1806 Feature: gene Location: 179331-180299 bp Feature: domain Description: PA_CoA_Oxy1 Location: 179388-180273 bp Feature: domain Description: PA_CoA_Oxy1 Location: 1793 88-180273 bp Feature: gene Location: 180386-181834 bp Feature: domain Description: PA_CoA_ligase Location: 180536-181820 bp Feature: domain Description: PA_CoA_ligase Location: 18053 6-181820 bp Feature: gene Location: 182188-182739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182191-182293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182191-182293 bp Feature: domain Description: GIIM Note: maturase Location: 182344-182575 bp Feature: domain Description: GIIM Note: maturase Location: 1823 44-182575 bp Feature: gene Location: 182839-184101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183043-183700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183 043 -183 700 bp Feature: domain Description: GIIM Note: maturase Location: 183781-184009 bp Feature: domain Description: GIIM Note: maturase Location: 183 781-184009 bp Feature: gene Location: 184624-185313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184819-185293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184819-185293 bp Feature: gene Location: 185904-186584 bp Feature: domain Description: thiol_BshB2 Location: 185934-186579 bp Feature: domain Description: thiol_BshB2 Location: 18593 4-186579 bp Feature: gene Location: 186584-186925 bp Feature: domain Description: DUF1806 Location: 186596-186923 bp Feature: domain Description: DUF1806 Location: 186596-186923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PA_CoA_Oxy1 (TIGR02156), PA_CoA_ligase (TIGR02155), RVT-GII, GIIM (pfam08388), thiol_BshB2 (TIGR04000), DUF1806 (pfam08830)