myRT

myRT report for GCA_001650025.1_De_novo

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Seq: LVVY01000129.1 Devosia elaeis strain S37 DIN_R1_(paired)_trimmed_(paired)_contig_79, whole genome shotgun sequence (30635 bp)
Overview 1 RT 1: 22551-29398 bp Neighborhood of RT #1 [22551, 29398] F420H2_quin_red DUF4440 RVT-UG2 PG_binding_1 DegQ Feature: gene Location: 22551-22969 bp Feature: domain Description: F420H2_quin_red Location: 22587-22704 bp Feature: domain Description: F420H2_quin_red Location: 22587-22704 bp Feature: gene Location: 23028-23378 bp Ori: OAM73877.1 Feature: domain Description: DUF4440 Location: 23088-23331 bp Feature: domain Description: DUF4440 Location: 23088-23331 bp Feature: gene Location: 23550-24977 bp Ori: OAM73878.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 23730-24624 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 23730-24624 bp Feature: gene Location: 25495-27231 bp Ori: OAM73879.1 Feature: domain Description: PG_binding_1 Location: 25618-25765 bp Feature: domain Description: PG_binding_1 Location: 2561 8-25765 bp Feature: domain Description: DegQ Location: 26257-26776 bp Feature: domain Description: DegQ Location: 26257-26776 bp Feature: gene Location: 27287-29398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT F420H2_quin_red (pfam04075), DUF4440 (pfam14534), RVT-UG2, PG_binding_1 (pfam01471), DegQ (pfam08181)

Seq: LVVY01000130.1 Devosia elaeis strain S37 DIN_R1_(paired)_trimmed_(paired)_contig_8, whole genome shotgun sequence (101754 bp)
Overview 1 RT 1: 48372-52290 bp Neighborhood of RT #1 [48372, 52290] FGE-sulfatase Avd_like RVT-DGRs Dam Feature: gene Location: 48372-49448 bp Ori: OAM73778.1 Feature: domain Description: FGE-sulfatase Location: 48627-48963 bp Feature: domain Description: FGE-sulfatase Location: 4862 7-48963 bp Feature: gene Location: 49529-49876 bp Ori: OAM73779.1 Feature: domain Description: Avd_like Location: 49547-49853 bp Feature: domain Description: Avd_like Location: 49547-49853 bp Feature: gene Location: 50165-51238 bp Ori: OAM73827.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50378-51008 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50378-51008 bp Feature: gene Location: 51231-52043 bp Ori: OAM73780.1 Feature: domain Description: Dam Location: 51276-51996 bp Feature: domain Description: Dam Location: 512 76-51996 bp Feature: gene Location: 52030-52290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, Dam (pfam05869)