myRT

myRT report for GCA_001650555.1_ASM165055v1

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Seq: JZDN01000012.1 Escherichia coli strain ED1914 EC1914_c12, whole genome shotgun sequence (76029 bp)
Overview 1 RT 1: 73980-76027 bp Neighborhood of RT #1 [73980, 76026] RVT-GII Feature: gene Location: 73980-74402 bp Feature: gene Location: 74433-74822 bp Feature: gene Location: 75208-76026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75661-76027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75661 -76027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JZDN01000180.1 Escherichia coli strain ED1914 EC1914_c180, whole genome shotgun sequence (601 bp)
Overview 1 RT 1: 1-541 bp Neighborhood of RT #1 [1, 540] RVT-GII Feature: gene Location: 1-540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172-541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 -541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JZDN01000019.1 Escherichia coli strain ED1914 EC1914_c19, whole genome shotgun sequence (74922 bp)
Overview 1 RT 1: 12150-15194 bp Neighborhood of RT #1 [12150, 15194] RVT-Retrons Feature: gene Location: 12150-12401 bp Feature: gene Location: 12441-13403 bp Feature: gene Location: 13403-14338 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13514-14099 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 514-14099 bp Feature: gene Location: 14687-14896 bp Feature: gene Location: 14901-15194 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JZDN01000060.1 Escherichia coli strain ED1914 EC1914_c60, whole genome shotgun sequence (87821 bp)
Overview 1 RT 1: 26572-30189 bp Neighborhood of RT #1 [26572, 30275] PRK11018 PRK09951 RVT-GII GIIM InsQ InsQ Feature: gene Location: 26572-26805 bp Feature: domain Description: PRK11018 Location: 26575-26803 bp Feature: domain Description: PRK11018 Location: 26575-26803 bp Feature: gene Location: 26914-27585 bp Feature: domain Description: PRK09951 Location: 26917-27580 bp Feature: domain Description: PRK09951 Location: 26917-27580 bp Feature: gene Location: 27670-29040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28006-28618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28006-28618 bp Feature: domain Description: GIIM Note: maturase Location: 28678-28882 bp Feature: domain Description: GIIM Note: maturase Location: 28678-28882 bp Feature: gene Location: 29037-29258 bp Feature: gene Location: 29457-30275 bp Feature: domain Description: InsQ Location: 29472-29898 bp Feature: domain Description: InsQ Location: 294 72-29898 bp Feature: domain Description: InsQ Location: 29898-30189 bp Feature: domain Description: InsQ Location: 29898-30189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11018 (putative sulfurtransferase YedF), PRK09951 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388), InsQ (COG0675)

Seq: JZDN01000080.1 Escherichia coli strain ED1914 EC1914_c80, whole genome shotgun sequence (14808 bp)
Overview 1 RT 1: 3209-6309 bp Neighborhood of RT #1 [3209, 6311] PinE RVT-GII GIIM HigB-like_toxin Feature: gene Location: 3209-3787 bp Feature: domain Description: PinE Location: 3227-3779 bp Feature: domain Description: PinE Location: 3227-3779 bp Feature: gene Location: 4242-4625 bp Feature: gene Location: 4622-5533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4826-5420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4826-5 420 bp Feature: gene Location: 5524-5865 bp Feature: domain Description: GIIM Note: maturase Location: 5569-5779 bp Feature: domain Description: GIIM Note: maturase Location: 5 5 69-5 779 bp Feature: gene Location: 6015-6311 bp Feature: domain Description: HigB-like_toxin Location: 6039-6309 bp Feature: domain Description: HigB-like_toxin Location: 6039-6309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), HigB-like_toxin (pfam05015)

Seq: JZDN01000087.1 Escherichia coli strain ED1914 EC1914_c87, whole genome shotgun sequence (943 bp)
Overview 1 RT 1: 203-848 bp Neighborhood of RT #1 [203, 940] RVT-GII GIIM Feature: gene Location: 203-940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206-551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206 -551 bp Feature: domain Description: GIIM Note: maturase Location: 641-848 bp Feature: domain Description: GIIM Note: maturase Location: 6 41-848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)