myRT

myRT report for GCA_001650975.1_ASM165097v1

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Seq: LXYQ01000085.1 Roseovarius indicus strain EhC03 A15_Contig23, whole genome shotgun sequence (230487 bp)
Overview 1 RT 1: 139732-148440 bp Neighborhood of RT #1 [139732, 148502] SIR2_2 YjgR YjgR RVT-UG16 MarC NhaP a_cpa1 CAP_ED Feature: gene Location: 139732-141087 bp Ori: OAO07107.1 Feature: domain Description: SIR2_2 Location: 140368-140815 bp Feature: domain Description: SIR2_2 Location: 1 40368-1 4081 5 bp Feature: gene Location: 141084-142892 bp Ori: OAO07108.1 Feature: domain Description: YjgR Location: 141258-141717 bp Feature: domain Description: YjgR Location: 1 41 258-1 41 71 7 bp Feature: domain Description: YjgR Location: 142434-142782 bp Feature: domain Description: YjgR Location: 1 42434-1 42782 bp Feature: gene Location: 142914-144377 bp Ori: OAO07109.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 143268-143667 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 1 43268-1 43667 bp Feature: gene Location: 145024-145704 bp Ori: OAO07110.1 Feature: domain Description: MarC Location: 145045-145630 bp Feature: domain Description: MarC Location: 1 45045-1 45630 bp Feature: gene Location: 146001-148502 bp Ori: OAO07111.1 Feature: domain Description: NhaP Location: 146013-147294 bp Feature: domain Description: NhaP Location: 1 4601 3-1 47294 bp Feature: domain Description: a_cpa1 Location: 147828-148047 bp Feature: domain Description: a_cpa1 Location: 1 47828-1 48047 bp Feature: domain Description: CAP_ED Location: 148125-148440 bp Feature: domain Description: CAP_ED Location: 1 481 25-1 48440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), YjgR (COG0433), RVT-UG16, MarC (pfam01914), NhaP (COG0025), a_cpa1 (TIGR00831), CAP_ED (cl00047)

Seq: LXYQ01000002.1 Roseovarius indicus strain EhC03 A15_Contig10, whole genome shotgun sequence (22596 bp)
Overview 1 RT 1: 19436-21675 bp Neighborhood of RT #1 [19436, 21806] PRK00724 FdsD RVT-Retrons HTH_XRE Feature: gene Location: 19436-20257 bp Ori: OAO10469.1 Feature: domain Description: PRK00724 Location: 19463-20228 bp Feature: domain Description: PRK0072 4 Location: 19463-2 02 2 8 bp Feature: gene Location: 20247-20453 bp Ori: OAO10470.1 Feature: domain Description: FdsD Location: 20262-20436 bp Feature: domain Description: FdsD Location: 2 02 62 -2 0436 bp Feature: gene Location: 20579-21520 bp Ori: OAO10471.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20798-21314 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 0798-2 1314 bp Feature: gene Location: 21501-21806 bp Ori: OAO10472.1 Feature: domain Description: HTH_XRE Location: 21513-21675 bp Feature: domain Description: HTH_XRE Location: 2 1513-2 1675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00724 (formate dehydrogenase accessory sulfurtransferase FdhD), FdsD (pfam11390), RVT-Retrons, HTH_XRE (smart00530)