myRT

myRT report for GCA_001653695.1_ASM165369v1

Download annotations/find similar RTs

Seq: LSVA01000065.1 Klebsiella pneumoniae strain INSali390 KpAli390_contig_68, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 518-1442 bp Neighborhood of RT #1 [518, 1834] RVT-GII Feature: gene Location: 518-712 bp Feature: gene Location: 824-1834 bp Ori: OAS03717.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 830-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 830-1 442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LSVA01000024.1 Klebsiella pneumoniae strain INSali390 KpAli390_contig_30, whole genome shotgun sequence (151748 bp)
Overview 1 RT 1: 30371-38989 bp Neighborhood of RT #1 [30371, 39006] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 30371-31084 bp Ori: OAS09466.1 Feature: domain Description: YqgA Location: 30377-31079 bp Feature: domain Description: YqgA Location: 30377-31079 bp Feature: gene Location: 31608-32846 bp Feature: domain Description: PRK09692 Location: 31614-32796 bp Feature: domain Description: PRK09692 Location: 31614-32 796 bp Feature: gene Location: 33523-35604 bp Ori: OAS09467.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33934-34378 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33934-34378 bp Feature: gene Location: 35601-38195 bp Ori: OAS09468.1 Feature: domain Description: FimD Location: 35643-38184 bp Feature: domain Description: FimD Location: 35643-38184 bp Feature: gene Location: 38242-39006 bp Ori: OAS09469.1 Feature: domain Description: FimC Location: 38287-38989 bp Feature: domain Description: FimC Location: 382 87-38989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)