myRT

myRT report for GCA_001653835.1_ASM165383v1

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Seq: LWUL01000095.1 Proteus mirabilis strain PM_125 contig_5, whole genome shotgun sequence (153157 bp)
Overview 1 RT 1: 2148-7671 bp Neighborhood of RT #1 [2148, 7673] YafY YafY DUF932 RVT_N RVT-GII GIIM HNHc Antirestrict YeeP Feature: gene Location: 2148-2855 bp Feature: domain Description: YafY Location: 2178-2343 bp Feature: domain Description: YafY Location: 21 78-2343 bp Feature: domain Description: YafY Location: 2514-2796 bp Feature: domain Description: YafY Location: 251 4-2796 bp Feature: gene Location: 3067-3828 bp Feature: domain Description: DUF932 Location: 3121-3778 bp Feature: domain Description: DUF932 Location: 31 21 -3778 bp Feature: gene Location: 4353-6053 bp Feature: RT Description: RVT_N Location: 4407-4650 bp Feature: RT Description: RVT_N Location: 4407-4650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4695-5331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4695-5331 bp Feature: domain Description: GIIM Note: maturase Location: 5382-5616 bp Feature: domain Description: GIIM Note: maturase Location: 5382-561 6 bp Feature: domain Description: HNHc Note: nucleases Location: 5850-5991 bp Feature: domain Description: HNHc Note: nucleases Location: 5850-5991 bp Feature: gene Location: 6284-6709 bp Feature: domain Description: Antirestrict Location: 6431-6707 bp Feature: domain Description: Antirestrict Location: 6431 -6707 bp Feature: gene Location: 6801-7673 bp Feature: domain Description: YeeP Location: 6825-7671 bp Feature: domain Description: YeeP Location: 6825-7671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafY (COG2378), DUF932 (pfam06067), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Antirestrict (pfam03230), YeeP (COG3596)

Seq: LWUL01000085.1 Proteus mirabilis strain PM_125 contig_40, whole genome shotgun sequence (29859 bp)
Overview 1 RT 1: 25278-28494 bp Neighborhood of RT #1 [25278, 29501] DUF4747 RVT-Retrons Feature: gene Location: 25278-25553 bp Feature: gene Location: 25879-26814 bp Feature: domain Description: DUF4747 Location: 25903-26725 bp Feature: domain Description: DUF4747 Location: 2 5903-2 672 5 bp Feature: gene Location: 27660-29501 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27795-28494 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 7795-2 8494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4747 (pfam15931), RVT-Retrons

Seq: LWUL01000056.1 Proteus mirabilis strain PM_125 contig_15, whole genome shotgun sequence (92585 bp)
Overview 1 RT 1: 67022-74219 bp Neighborhood of RT #1 [67022, 74227] YqiC ABC_ATPase ABC_ATPase RVT-Retrons PRK11316 PRK11072 Feature: gene Location: 67022-67336 bp Feature: domain Description: YqiC Location: 67025-67277 bp Feature: domain Description: YqiC Location: 67025-67277 bp Feature: gene Location: 67397-68704 bp Feature: domain Description: ABC_ATPase Location: 67445-67544 bp Feature: domain Description: ABC_ATPase Location: 67445-67544 bp Feature: domain Description: ABC_ATPase Location: 67934-68126 bp Feature: domain Description: ABC_ATPase Location: 6793 4-68126 bp Feature: gene Location: 68704-69657 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68824-69385 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68824-693 85 bp Feature: gene Location: 69868-71292 bp Feature: domain Description: PRK11316 Location: 69871-71287 bp Feature: domain Description: PRK113 16 Location: 69871-71287 bp Feature: gene Location: 71393-74227 bp Feature: domain Description: PRK11072 Location: 71408-74219 bp Feature: domain Description: PRK11072 Location: 71408-74219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqiC (COG2960), ABC_ATPase (pfam09818), RVT-Retrons, PRK11316 (bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE), PRK11072 (bifunctional adenylyltransferase)