myRT

myRT report for GCA_001655825.1_ASM165582v1

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Seq: LWQX01000011.1 Streptobacillus moniliformis strain NCTC 11194 contig_20, whole genome shotgun sequence (49757 bp)
Overview 1 RT 1: 20332-24561 bp Neighborhood of RT #1 [20332, 24623] Relaxase RVT-GII Intron_maturas2 Relaxase MobC Feature: gene Location: 20332-21531 bp Feature: domain Description: Relaxase Location: 20434-20842 bp Feature: domain Description: Relaxase Location: 20434-20842 bp Feature: gene Location: 21532-21666 bp Feature: gene Location: 21754-23409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22078-22900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22078-22900 bp Feature: domain Description: Intron_maturas2 Location: 22999-23281 bp Feature: domain Description: Intron_maturas2 Location: 22999-23281 bp Feature: gene Location: 23872-24243 bp Feature: domain Description: Relaxase Location: 23902-24223 bp Feature: domain Description: Relaxase Location: 23902-24223 bp Feature: gene Location: 24282-24623 bp Feature: domain Description: MobC Location: 24504-24561 bp Feature: domain Description: MobC Location: 24504-24561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), RVT-GII, Intron_maturas2 (pfam01348), MobC (pfam05713)

Seq: LWQX01000001.1 Streptobacillus moniliformis strain NCTC 11194 contig_5, whole genome shotgun sequence (129584 bp)
Overview 1 RT 1: 22650-28221 bp Neighborhood of RT #1 [22650, 28241] SR_TndX_transposase Recombinase Zn_ribbon_recom RVT-GII VirD4 DUF3801 Feature: gene Location: 22650-23942 bp Feature: domain Description: SR_TndX_transposase Location: 22674-23088 bp Feature: domain Description: SR_TndX_transposase Location: 2 2 674-2 3088 bp Feature: domain Description: Recombinase Location: 23190-23547 bp Feature: domain Description: Recombinase Location: 2 3190-2 3547 bp Feature: domain Description: Zn_ribbon_recom Location: 23592-23775 bp Feature: domain Description: Zn_ribbon_recom Location: 2 3592 -2 3775 bp Feature: gene Location: 23982-24176 bp Feature: gene Location: 24397-26304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24727-25471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 472 7-2 5471 bp Feature: gene Location: 27115-27759 bp Feature: domain Description: VirD4 Location: 27358-27745 bp Feature: domain Description: VirD4 Location: 2 7358-2 7745 bp Feature: gene Location: 27756-28241 bp Feature: domain Description: DUF3801 Location: 27825-28221 bp Feature: domain Description: DUF3801 Location: 2 782 5-2 82 2 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, VirD4 (COG3505), DUF3801 (pfam12687)