myRT

myRT report for GCA_001655925.1_ASM165592v1

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Seq: LXKJ01000084.1 Streptobacillus moniliformis strain B5/1 contig_3, whole genome shotgun sequence (134960 bp)
Overview 1 RT 1: 43553-48941 bp Neighborhood of RT #1 [43553, 49108] DUF3801 DUF3801 VirD4 RVT-GII SR_TndX_transposase Recombinase Zn_ribbon_recom Feature: gene Location: 43553-44002 bp Feature: domain Description: DUF3801 Location: 43586-43877 bp Feature: domain Description: DUF3801 Location: 43586-43877 bp Feature: domain Description: DUF3801 Location: 43883-43985 bp Feature: domain Description: DUF3801 Location: 43883-43985 bp Feature: gene Location: 43999-44643 bp Feature: domain Description: VirD4 Location: 44242-44629 bp Feature: domain Description: VirD4 Location: 44242-44629 bp Feature: gene Location: 45454-47361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45784-46528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45784-46528 bp Feature: gene Location: 47582-47776 bp Feature: gene Location: 47816-49108 bp Feature: domain Description: SR_TndX_transposase Location: 47840-48254 bp Feature: domain Description: SR_TndX_transposase Location: 47840-48254 bp Feature: domain Description: Recombinase Location: 48356-48713 bp Feature: domain Description: Recombinase Location: 48356-4871 3 bp Feature: domain Description: Zn_ribbon_recom Location: 48758-48941 bp Feature: domain Description: Zn_ribbon_recom Location: 48758-48941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)