myRT

myRT report for GCA_001656925.1_ASM165692v1

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Seq: JTIB01000012.1 Lactobacillus rhamnosus strain Lrh28 Lrh28_contig00012, whole genome shotgun sequence (90472 bp)
Overview 1 RT 1: 19884-25868 bp Neighborhood of RT #1 [19884, 27955] DDE_Tnp_1 DDE_5 RVT-UG2 HTH_XRE LysM SMC_prok_B Feature: gene Location: 19884-20510 bp Ori: OAU46333.1 Feature: domain Description: DDE_Tnp_1 Location: 19929-20268 bp Feature: domain Description: DDE_Tnp_1 Location: 1 9929-20268 bp Feature: gene Location: 20629-20979 bp Ori: OAU46334.1 Feature: domain Description: DDE_5 Location: 20650-20950 bp Feature: domain Description: DDE_5 Location: 20650-20950 bp Feature: gene Location: 21108-22694 bp Ori: OAU46276.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 21318-22188 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 21 31 8-221 88 bp Feature: gene Location: 23371-23697 bp Ori: OAU46277.1 Feature: domain Description: HTH_XRE Location: 23398-23569 bp Feature: domain Description: HTH_XRE Location: 23398-23569 bp Feature: gene Location: 24353-27955 bp Ori: OAU46278.1 Feature: domain Description: LysM Location: 24641-24779 bp Feature: domain Description: LysM Location: 24641 -24779 bp Feature: domain Description: SMC_prok_B Location: 25004-25868 bp Feature: domain Description: SMC_prok_B Location: 25004-25868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), DDE_5 (pfam13546), RVT-UG2, HTH_XRE (smart00530), LysM (smart00257), SMC_prok_B (TIGR02168)