myRT

myRT report for GCA_001657135.1_ASM165713v1

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Seq: JTIR01000036.1 Lactobacillus rhamnosus strain Lrh13 Lrh13_contig00036, whole genome shotgun sequence (28191 bp)
Overview 1 RT 1: 541-6525 bp Neighborhood of RT #1 [541, 8612] DDE_Tnp_1 DDE_5 RVT-UG2 HTH_XRE LysM SMC_prok_B Feature: gene Location: 541-1167 bp Ori: OAU35547.1 Feature: domain Description: DDE_Tnp_1 Location: 586-925 bp Feature: domain Description: DDE_Tnp_1 Location: 586-925 bp Feature: gene Location: 1286-1636 bp Ori: OAU35548.1 Feature: domain Description: DDE_5 Location: 1307-1607 bp Feature: domain Description: DDE_5 Location: 1 307-1 607 bp Feature: gene Location: 1765-3351 bp Ori: OAU35528.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1975-2845 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 975-2845 bp Feature: gene Location: 4028-4354 bp Ori: OAU35529.1 Feature: domain Description: HTH_XRE Location: 4055-4226 bp Feature: domain Description: HTH_XRE Location: 4055-4226 bp Feature: gene Location: 5010-8612 bp Ori: OAU35530.1 Feature: domain Description: LysM Location: 5298-5436 bp Feature: domain Description: LysM Location: 5298-5436 bp Feature: domain Description: SMC_prok_B Location: 5661-6525 bp Feature: domain Description: SMC_prok_B Location: 5661 -6525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), DDE_5 (pfam13546), RVT-UG2, HTH_XRE (smart00530), LysM (smart00257), SMC_prok_B (TIGR02168)