myRT

myRT report for GCA_001657325.1_ASM165732v1

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Seq: LWRO01000024.1 Geitlerinema sp. BBD 1991-9 scaffold_104, whole genome shotgun sequence (66743 bp)
Overview 1 RT 1: 63630-66740 bp Neighborhood of RT #1 [63630, 66740] RVT_N RVT-GII GIIM McrA Feature: gene Location: 63630-63908 bp Feature: gene Location: 64089-64253 bp Feature: gene Location: 64346-66145 bp Feature: domain Description: RVT_N Location: 64388-64634 bp Feature: domain Description: RVT_N Location: 64388-64634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64676-65345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64676-65345 bp Feature: domain Description: GIIM Note: maturase Location: 65447-65678 bp Feature: domain Description: GIIM Note: maturase Location: 65447-65678 bp Feature: domain Description: McrA Location: 65750-66035 bp Feature: domain Description: McrA Location: 65750-66035 bp Feature: gene Location: 66268-66501 bp Feature: gene Location: 66588-66740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: LWRO01000049.1 Geitlerinema sp. BBD 1991-9 scaffold_206, whole genome shotgun sequence (53315 bp)
Overview 1 RT 1: 916-4489 bp Neighborhood of RT #1 [916, 4500] RVT-GII GIIM InsQ MscS Feature: gene Location: 916-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952-1576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952 -1576 bp Feature: domain Description: GIIM Note: maturase Location: 1633-1861 bp Feature: domain Description: GIIM Note: maturase Location: 1633-1861 bp Feature: gene Location: 2361-2765 bp Feature: domain Description: InsQ Location: 2373-2676 bp Feature: domain Description: InsQ Location: 2 373-2 676 bp Feature: gene Location: 2773-4500 bp Feature: domain Description: MscS Location: 3706-4489 bp Feature: domain Description: MscS Location: 3706-4489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsQ (COG0675), MscS (COG0668)

Seq: LWRO01000083.1 Geitlerinema sp. BBD 1991-9 scaffold_430, whole genome shotgun sequence (17716 bp)
Overview 1 RT 1: 3952-11812 bp Neighborhood of RT #1 [3952, 11820] CHASE2 PRK15347 PRK15347 RVT-UG7 Tex Feature: gene Location: 3952-6822 bp Feature: domain Description: CHASE2 Location: 4084-5254 bp Feature: domain Description: CHASE2 Location: 4084-5254 bp Feature: domain Description: PRK15347 Location: 5296-6127 bp Feature: domain Description: PRK153 47 Location: 5296-6127 bp Feature: domain Description: PRK15347 Location: 6208-6541 bp Feature: domain Description: PRK153 47 Location: 6208-6541 bp Feature: gene Location: 6819-7082 bp Feature: gene Location: 7655-8551 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 7661-7811 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 7661-7811 bp Feature: gene Location: 8819-9196 bp Feature: gene Location: 9643-11820 bp Feature: domain Description: Tex Location: 9664-11812 bp Feature: domain Description: Tex Location: 9664-11812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHASE2 (smart01080), PRK15347 (two component system sensor kinase), RVT-UG7, Tex (COG2183)

Seq: LWRO01000012.1 Geitlerinema sp. BBD 1991-9 scaffold_71, whole genome shotgun sequence (102111 bp)
Overview 1 RT 1: 94060-97828 bp Neighborhood of RT #1 [94060, 97828] ParE antidote_CC2985 RVT-CRISPR cas1 Cas2_I_II_III Feature: gene Location: 94060-94350 bp Feature: domain Description: ParE Location: 94063-94339 bp Feature: domain Description: ParE Location: 94 063-94 339 bp Feature: gene Location: 94353-94601 bp Feature: domain Description: antidote_CC2985 Location: 94356-94518 bp Feature: domain Description: antidote_CC2985 Location: 94 356-94 518 bp Feature: gene Location: 94673-96982 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 95180-95780 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 95180-95780 bp Feature: domain Description: cas1 Location: 95984-96953 bp Feature: domain Description: cas1 Location: 95984 -96953 bp Feature: gene Location: 97211-97495 bp Feature: domain Description: Cas2_I_II_III Location: 97226-97457 bp Feature: domain Description: Cas2_I_II_III Location: 97226-974 57 bp Feature: gene Location: 97511-97828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), antidote_CC2985 (TIGR02606), RVT-CRISPR, cas1 (TIGR00287), Cas2_I_II_III (cl11442)