myRT

myRT report for GCA_001657505.1_ASM165750v1

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Seq: LWUK01000066.1 Escherichia coli strain 009PP2015 NODE_6_length_233781_cov_47.3397_ID_4965, whole genome shotgun sequence (233781 bp)
Overview 1 RT 1: 105540-113157 bp Neighborhood of RT #1 [105540, 113192] Nuc_deoxyrib_tr RVT-Retrons AAA_15 DUF4917 Feature: gene Location: 105540-105791 bp Feature: gene Location: 105788-106657 bp Ori: OAV51323.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 106310-106481 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 0631 0-1 06481 bp Feature: gene Location: 107313-108413 bp Ori: OAV51324.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 107493-108027 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 07493-1 08027 bp Feature: gene Location: 108528-110774 bp Ori: OAV51325.1 Feature: domain Description: AAA_15 Location: 108531-109539 bp Feature: domain Description: AAA_1 5 Location: 1 08531 -1 09539 bp Feature: gene Location: 112173-113192 bp Ori: OAV51326.1 Feature: domain Description: DUF4917 Location: 112233-113157 bp Feature: domain Description: DUF491 7 Location: 1 1 2233-1 1 31 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263)

Seq: LWUK01000003.1 Escherichia coli strain 009PP2015 NODE_10_length_184271_cov_53.0368_ID_4973, whole genome shotgun sequence (184271 bp)
Overview 1 RT 1: 131030-134912 bp Neighborhood of RT #1 [131030, 134917] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 131030-131746 bp Ori: OAV62294.1 Gene: rph Feature: domain Description: rph Location: 131033-131741 bp Feature: domain Description: rph Location: 131033-131741 bp Feature: gene Location: 131812-132453 bp Ori: OAV62295.1 Gene: pyrE Feature: domain Description: pyrE Location: 131815-132448 bp Feature: domain Description: pyrE Location: 131815-132 448 bp Feature: gene Location: 132751-133710 bp Ori: OAV62296.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132886-133435 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132 886-133435 bp Feature: gene Location: 133756-134352 bp Ori: OAV62297.1 Gene: slmA Feature: domain Description: slmA Location: 133762-134338 bp Feature: domain Description: slmA Location: 133762 -134338 bp Feature: gene Location: 134459-134917 bp Ori: OAV62298.1 Feature: domain Description: dut Location: 134465-134912 bp Feature: domain Description: dut Location: 134465-134912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)