myRT

myRT report for GCA_001657685.1_ASM165768v1

Download annotations/find similar RTs

Seq: LWTG01000002.1 Streptobacillus moniliformis strain A378/1 contig_30, whole genome shotgun sequence (113998 bp)
Overview 1 RT 1: 26179-31567 bp Neighborhood of RT #1 [26179, 31734] DUF3801 DUF3801 VirD4 RVT-GII SR_TndX_transposase Recombinase Zn_ribbon_recom Feature: gene Location: 26179-26628 bp Feature: domain Description: DUF3801 Location: 26212-26503 bp Feature: domain Description: DUF3801 Location: 2621 2-26503 bp Feature: domain Description: DUF3801 Location: 26509-26611 bp Feature: domain Description: DUF3801 Location: 26509-2661 1 bp Feature: gene Location: 26625-27269 bp Feature: domain Description: VirD4 Location: 26868-27255 bp Feature: domain Description: VirD4 Location: 26868-27255 bp Feature: gene Location: 28080-29987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28410-29154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2841 0-291 54 bp Feature: gene Location: 30208-30402 bp Feature: gene Location: 30442-31734 bp Feature: domain Description: SR_TndX_transposase Location: 30466-30880 bp Feature: domain Description: SR_TndX_transposase Location: 30466-30880 bp Feature: domain Description: Recombinase Location: 30982-31339 bp Feature: domain Description: Recombinase Location: 30982-31 339 bp Feature: domain Description: Zn_ribbon_recom Location: 31384-31567 bp Feature: domain Description: Zn_ribbon_recom Location: 31 384-31 567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)