myRT

myRT report for GCA_001657765.1_ASM165776v1

Download annotations/find similar RTs

Seq: LWTB01000001.1 Streptobacillus moniliformis strain IPDH 109/83 contig_10, whole genome shotgun sequence (209398 bp)
Overview 1 RT 1: 53446-58834 bp Neighborhood of RT #1 [53446, 59001] DUF3801 DUF3801 VirD4 RVT-GII SR_TndX_transposase Recombinase Zn_ribbon_recom Feature: gene Location: 53446-53895 bp Feature: domain Description: DUF3801 Location: 53479-53770 bp Feature: domain Description: DUF3801 Location: 53479-53770 bp Feature: domain Description: DUF3801 Location: 53776-53878 bp Feature: domain Description: DUF3801 Location: 53776-53878 bp Feature: gene Location: 53892-54536 bp Feature: domain Description: VirD4 Location: 54135-54522 bp Feature: domain Description: VirD4 Location: 541 35-54522 bp Feature: gene Location: 55347-57254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55677-56421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55677-56421 bp Feature: gene Location: 57475-57669 bp Feature: gene Location: 57709-59001 bp Feature: domain Description: SR_TndX_transposase Location: 57733-58147 bp Feature: domain Description: SR_TndX_transposase Location: 57733-581 47 bp Feature: domain Description: Recombinase Location: 58249-58606 bp Feature: domain Description: Recombinase Location: 58249-58606 bp Feature: domain Description: Zn_ribbon_recom Location: 58651-58834 bp Feature: domain Description: Zn_ribbon_recom Location: 58651 -58834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)