myRT

myRT report for GCA_001657815.1_ASM165781v1

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Seq: LWTC01000001.1 Streptobacillus moniliformis strain ATCC 49567 contig_6, whole genome shotgun sequence (222313 bp)
Overview 1 RT 1: 146651-152222 bp Neighborhood of RT #1 [146651, 152242] SR_TndX_transposase Recombinase Zn_ribbon_recom RVT-GII VirD4 DUF3801 Feature: gene Location: 146651-147943 bp Feature: domain Description: SR_TndX_transposase Location: 146675-147089 bp Feature: domain Description: SR_TndX_transposase Location: 1 46675-1 47089 bp Feature: domain Description: Recombinase Location: 147191-147548 bp Feature: domain Description: Recombinase Location: 1 471 91 -1 47548 bp Feature: domain Description: Zn_ribbon_recom Location: 147593-147776 bp Feature: domain Description: Zn_ribbon_recom Location: 1 47593-1 47776 bp Feature: gene Location: 147983-148177 bp Feature: gene Location: 148398-150305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148728-149472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48728-1 49472 bp Feature: gene Location: 151116-151760 bp Feature: domain Description: VirD4 Location: 151359-151746 bp Feature: domain Description: VirD4 Location: 1 51 359-1 51 746 bp Feature: gene Location: 151757-152242 bp Feature: domain Description: DUF3801 Location: 151826-152222 bp Feature: domain Description: DUF3801 Location: 1 51 826-1 52222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, VirD4 (COG3505), DUF3801 (pfam12687)