myRT

myRT report for GCA_001657835.1_ASM165783v1

Download annotations/find similar RTs

Seq: LWTF01000001.1 Streptobacillus moniliformis strain B10/15 contig_30, whole genome shotgun sequence (135398 bp)
Overview 1 RT 1: 44085-49473 bp Neighborhood of RT #1 [44085, 49640] DUF3801 DUF3801 VirD4 RVT-GII SR_TndX_transposase Recombinase Zn_ribbon_recom Feature: gene Location: 44085-44534 bp Feature: domain Description: DUF3801 Location: 44118-44409 bp Feature: domain Description: DUF3801 Location: 441 1 8-44409 bp Feature: domain Description: DUF3801 Location: 44415-44517 bp Feature: domain Description: DUF3801 Location: 4441 5-4451 7 bp Feature: gene Location: 44531-45175 bp Feature: domain Description: VirD4 Location: 44774-45161 bp Feature: domain Description: VirD4 Location: 44774-451 61 bp Feature: gene Location: 45986-47893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46316-47060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4631 6-47060 bp Feature: gene Location: 48114-48308 bp Feature: gene Location: 48348-49640 bp Feature: domain Description: SR_TndX_transposase Location: 48372-48786 bp Feature: domain Description: SR_TndX_transposase Location: 48372-48786 bp Feature: domain Description: Recombinase Location: 48888-49245 bp Feature: domain Description: Recombinase Location: 48888-49245 bp Feature: domain Description: Zn_ribbon_recom Location: 49290-49473 bp Feature: domain Description: Zn_ribbon_recom Location: 49290-49473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)