myRT

myRT report for GCA_001661965.1_ASM166196v1

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Seq: LYWZ01000011.1 Croceicoccus mobilis strain Ery22 Ery22_C11, whole genome shotgun sequence (268435 bp)
Overview 1 RT 1: 52166-56953 bp Neighborhood of RT #1 [52166, 56964] HTH_21 RVT-GII GIIM PGDH Feature: gene Location: 52166-52336 bp Feature: gene Location: 52396-52782 bp Feature: domain Description: HTH_21 Location: 52420-52582 bp Feature: domain Description: HTH_21 Location: 52420-52582 bp Feature: gene Location: 53441-54847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53591-54326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53591 -54326 bp Feature: domain Description: GIIM Note: maturase Location: 54398-54626 bp Feature: domain Description: GIIM Note: maturase Location: 54398-54626 bp Feature: gene Location: 55121-55255 bp Feature: gene Location: 55960-56964 bp Feature: domain Description: PGDH Location: 55972-56953 bp Feature: domain Description: PGDH Location: 55972-56953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT-GII, GIIM (pfam08388), PGDH (TIGR01327)

Seq: LYWZ01000021.1 Croceicoccus mobilis strain Ery22 Ery22_C21, whole genome shotgun sequence (162096 bp)
Overview 1 RT 1: 154065-162055 bp Neighborhood of RT #1 [154065, 162057] HisKA INT_C_like_1 RVT-UG5 PHA02517 Feature: gene Location: 154065-155948 bp Feature: domain Description: HisKA Location: 155265-155463 bp Feature: domain Description: HisKA Location: 1552 65-155463 bp Feature: gene Location: 156176-157831 bp Feature: domain Description: INT_C_like_1 Location: 157265-157802 bp Feature: domain Description: INT_C_like_1 Location: 1572 65-157802 bp Feature: gene Location: 157997-160897 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 158270-158771 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1582 70-158771 bp Feature: gene Location: 160906-161088 bp Feature: gene Location: 161149-162057 bp Feature: domain Description: PHA02517 Location: 161215-162055 bp Feature: domain Description: PHA02 517 Location: 1612 15-162 055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HisKA (smart00388), INT_C_like_1 (cd01184), RVT-UG5, PHA02517 (putative transposase OrfB; Reviewed)