myRT

myRT report for GCA_001662105.1_ASM166210v1

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Seq: LYPM01000020.1 Rhizobium aegyptiacum strain 950 scf20_contig_2, whole genome shotgun sequence (131580 bp)
Overview 1 RT 1: 16613-19813 bp Neighborhood of RT #1 [16613, 19848] PRK09183 RVT-GII GIIM DDE_Tnp_IS1595 PIN_VapC4-5_FitB-like Feature: gene Location: 16613-16753 bp Feature: domain Description: PRK09183 Location: 16616-16715 bp Feature: domain Description: PRK091 83 Location: 1 661 6-1 671 5 bp Feature: gene Location: 16774-17241 bp Feature: gene Location: 17238-18710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17604-18219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7604-1 821 9 bp Feature: domain Description: GIIM Note: maturase Location: 18285-18495 bp Feature: domain Description: GIIM Note: maturase Location: 1 8285-1 8495 bp Feature: gene Location: 18901-19215 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 18910-19135 bp Feature: domain Description: DDE_Tnp_IS1 595 Location: 1 891 0-1 91 35 bp Feature: gene Location: 19399-19848 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 19414-19813 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 1 941 4-1 981 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09183 (transposase/IS protein; Provisional), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS1595 (pfam12762), PIN_VapC4-5_FitB-like (cd18754)

Seq: LYPM01000029.1 Rhizobium aegyptiacum strain 950 scf29_contig_2, whole genome shotgun sequence (34545 bp)
Overview 1 RT 1: 6327-9999 bp 2 RT 2: 30685-34367 bp Neighborhood of RT #1 [6327, 9999] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [30685, 34450] DDE_Tnp_ISAZ013 RVT-GII RVT-GII DDE_Tnp_ISAZ013 DUF736 Feature: gene Location: 6327-6779 bp Feature: domain Description: PHA02517 Location: 6393-6747 bp Feature: domain Description: PHA02 517 Location: 6393-6747 bp Feature: gene Location: 7020-7229 bp Feature: gene Location: 7398-8927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7671-8406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7671-8406 bp Feature: domain Description: GIIM Note: maturase Location: 8478-8706 bp Feature: domain Description: GIIM Note: maturase Location: 8478-8706 bp Feature: gene Location: 9028-9486 bp Feature: domain Description: PHA02517 Location: 9031-9484 bp Feature: domain Description: PHA02 517 Location: 9031-9484 bp Feature: gene Location: 9595-9999 bp Feature: gene Location: 30685-31296 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 30967-31273 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 30967-312 73 bp Feature: gene Location: 31601-31750 bp Feature: gene Location: 31812-32279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32028-32253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 02 8-32 2 53 bp Feature: gene Location: 32357-33007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32489-32822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 489-32 82 2 bp Feature: gene Location: 33028-33723 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 33118-33700 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 33118-33700 bp Feature: gene Location: 33764-34450 bp Feature: domain Description: DUF736 Location: 34169-34367 bp Feature: domain Description: DUF736 Location: 34169-34367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_ISAZ013 (pfam07592), DUF736 (pfam05284)

Seq: LYPM01000036.1 Rhizobium aegyptiacum strain 950 scf36_contig_2, whole genome shotgun sequence (6931 bp)
Overview 1 RT 1: 3004-6750 bp Neighborhood of RT #1 [3004, 6750] MPP_GpdQ DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII RVT-GII Feature: gene Location: 3004-3513 bp Feature: domain Description: MPP_GpdQ Location: 3247-3400 bp Feature: domain Description: MPP_GpdQ Location: 3 247-3 400 bp Feature: gene Location: 3361-4416 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3388-4255 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3 3 88-4255 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4276-4387 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4276-43 87 bp Feature: gene Location: 4502-5476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5240-5408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5240-5408 bp Feature: gene Location: 5551-6324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5557-5929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5557-5929 bp Feature: gene Location: 6355-6750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_GpdQ (cd07402), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII