myRT

myRT report for GCA_001665995.1_ASM166599v1

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Seq: LTBD01000026.1 Klebsiella pneumoniae strain KPNIH38 NODE_26, whole genome shotgun sequence (34498 bp)
Overview 1 RT 1: 603-5939 bp Neighborhood of RT #1 [603, 5947] fn3_3 InsE RVT-GII GIIM COG3547 PHA02517 Feature: gene Location: 603-1001 bp Ori: OBE82433.1 Feature: domain Description: fn3_3 Location: 777-990 bp Feature: domain Description: fn3_3 Location: 777-990 bp Feature: gene Location: 1189-1467 bp Ori: OBE82434.1 Feature: domain Description: InsE Location: 1201-1459 bp Feature: domain Description: InsE Location: 1 201 -1 459 bp Feature: gene Location: 2541-4049 bp Ori: OBE82459.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2799-3531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2799-3531 bp Feature: domain Description: GIIM Note: maturase Location: 3606-3804 bp Feature: domain Description: GIIM Note: maturase Location: 3606-3804 bp Feature: gene Location: 4591-5667 bp Ori: OBE82435.1 Feature: domain Description: COG3547 Location: 4630-5551 bp Feature: domain Description: COG3547 Location: 4630-5551 bp Feature: gene Location: 5735-5947 bp Ori: OBE82436.1 Feature: domain Description: PHA02517 Location: 5738-5939 bp Feature: domain Description: PHA0251 7 Location: 5738-5939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fn3_3 (pfam14686), InsE (COG2963), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed)

Seq: LTBD01000016.1 Klebsiella pneumoniae strain KPNIH38 NODE_16, whole genome shotgun sequence (118523 bp)
Overview 1 RT 1: 37411-45075 bp Neighborhood of RT #1 [37411, 45107] RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like PRK04247 RVT-UG5 IncA Peptidase_M78 Feature: gene Location: 37411-39129 bp Ori: OBE84376.1 Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 37738-38272 bp Feature: domain Description: RMtype1_S_Ppo2 1ORF8840P_TRD1-CR1_like Location: 37738-382 72 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 38722-39100 bp Feature: domain Description: RMtype1_S_Ppo2 1ORF8840P_TRD1-CR1_like Location: 3872 2 -39100 bp Feature: gene Location: 39140-40240 bp Ori: OBE84377.1 Feature: domain Description: PRK04247 Location: 39203-39434 bp Feature: domain Description: PRK042 47 Location: 392 03-39434 bp Feature: gene Location: 40420-43437 bp Ori: OBE84378.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 40918-41413 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 40918-41413 bp Feature: gene Location: 43885-44559 bp Ori: OBE84379.1 Feature: domain Description: IncA Location: 44176-44518 bp Feature: domain Description: IncA Location: 44176-44518 bp Feature: gene Location: 44562-45107 bp Ori: OBE84380.1 Feature: domain Description: Peptidase_M78 Location: 44712-45075 bp Feature: domain Description: Peptidase_M78 Location: 44712 -45075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293), PRK04247 (endonuclease NucS), RVT-UG5, IncA, Peptidase_M78 (pfam06114)

Seq: LTBD01000003.1 Klebsiella pneumoniae strain KPNIH38 NODE_3, whole genome shotgun sequence (406735 bp)
Overview 1 RT 1: 7037-11230 bp Neighborhood of RT #1 [7037, 11230] RepL RVT-AbiP2 PRK10947 Feature: gene Location: 7037-7258 bp Feature: gene Location: 7909-8454 bp Ori: OBE90409.1 Feature: domain Description: RepL Location: 8032-8404 bp Feature: domain Description: RepL Location: 803 2-8404 bp Feature: gene Location: 8809-10353 bp Ori: OBE90410.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9238-9697 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 923 8-9697 bp Feature: gene Location: 10550-10810 bp Ori: OBE90411.1 Feature: domain Description: PRK10947 Location: 10565-10787 bp Feature: domain Description: PRK10947 Location: 10565-10787 bp Feature: gene Location: 10880-11230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RepL (pfam05732), RVT-AbiP2, PRK10947 (DNA-binding transcriptional regulator H-NS)