myRT

myRT report for GCA_001671525.1_ASM167152v1

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Seq: LZTI01000027.1 Mesorhizobium loti strain R7ANS::ICEMlSym2014 contig_5, whole genome shotgun sequence (485640 bp)
Overview 1 RT 1: 1449-9464 bp Neighborhood of RT #1 [1449, 9496] PepP AccC RVT-GII group_II_RT_mat Mal CaiB Feature: gene Location: 1449-2585 bp Ori: OBP72195.1 Feature: domain Description: PepP Location: 1482-2574 bp Feature: domain Description: PepP Location: 1 482-2574 bp Feature: gene Location: 3879-5102 bp Ori: OBP72196.1 Feature: domain Description: AccC Location: 3882-5094 bp Feature: domain Description: AccC Location: 3882-5094 bp Feature: gene Location: 5300-6340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5303-5387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5303-5387 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5948-6221 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5948-6221 bp Feature: gene Location: 7075-8328 bp Ori: OBP72197.1 Feature: domain Description: Mal Location: 7078-8302 bp Feature: domain Description: Mal Location: 7078-8302 bp Feature: gene Location: 8345-9496 bp Ori: OBP72554.1 Feature: domain Description: CaiB Location: 8351-9464 bp Feature: domain Description: CaiB Location: 8351 -9464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepP (COG0006), AccC (COG0439), RVT-GII, group_II_RT_mat (TIGR04416), Mal (COG3799), CaiB (COG1804)

Seq: LZTI01000001.1 Mesorhizobium loti strain R7ANS::ICEMlSym2014 contig_1, whole genome shotgun sequence (1229479 bp)
Overview 1 RT 1: 674413-679853 bp Neighborhood of RT #1 [674413, 680467] INT_C_like_1 RVT-UG12 PinE S14_ClpP_1 Feature: gene Location: 674413-674664 bp Feature: gene Location: 674743-676212 bp Ori: OBP80651.1 Feature: domain Description: INT_C_like_1 Location: 675664-676105 bp Feature: domain Description: INT_C_like_1 Location: 675664-676105 bp Feature: gene Location: 676883-678184 bp Ori: OBP80652.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 676886-677159 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 676886-677159 bp Feature: gene Location: 678898-679497 bp Ori: OBP80653.1 Feature: domain Description: PinE Location: 678946-679486 bp Feature: domain Description: PinE Location: 678946-679486 bp Feature: gene Location: 679526-680467 bp Ori: OBP80654.1 Feature: domain Description: S14_ClpP_1 Location: 679712-679853 bp Feature: domain Description: S14_ClpP_1 Location: 679712 -679853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_1 (cd01184), RVT-UG12, PinE (COG1961), S14_ClpP_1 (cd07016)