myRT

myRT report for GCA_001672255.1_ASM167225v1

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Seq: LJOQ01000077.1 Anabaena sp. AL09 isolate 39864, whole genome shotgun sequence (39655 bp)
Overview 1 RT 1: 23223-28634 bp Neighborhood of RT #1 [23223, 28747] RelE RVT-UG14 NifU_proper FeS_nifS Feature: gene Location: 23223-23501 bp Ori: OBQ05247.1 Feature: domain Description: RelE Location: 23229-23499 bp Feature: domain Description: RelE Location: 23229-23499 bp Feature: gene Location: 23482-23694 bp Feature: gene Location: 23887-25389 bp Ori: OBQ05248.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 24298-24781 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 24298-24781 bp Feature: gene Location: 26488-27387 bp Ori: OBQ05249.1 Feature: domain Description: NifU_proper Location: 26491-27385 bp Feature: domain Description: NifU_proper Location: 26491 -27385 bp Feature: gene Location: 27482-28747 bp Ori: OBQ05250.1 Feature: domain Description: FeS_nifS Location: 27500-28634 bp Feature: domain Description: FeS_nifS Location: 27500-28634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelE (pfam06296), RVT-UG14, NifU_proper (TIGR02000), FeS_nifS (TIGR03402)

Seq: LJOQ01000100.1 Anabaena sp. AL09 isolate 39864, whole genome shotgun sequence (118029 bp)
Overview 1 RT 1: 596-4430 bp Neighborhood of RT #1 [596, 4528] RVT_N RVT-GII McrA bS6_chloro_cyano Smc Feature: gene Location: 596-2128 bp Ori: OBQ01879.1 Feature: domain Description: RVT_N Location: 602-839 bp Feature: domain Description: RVT_N Location: 602 -839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890-1544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890-1544 bp Feature: domain Description: McrA Location: 1781-2099 bp Feature: domain Description: McrA Location: 1781-2 099 bp Feature: gene Location: 3329-3652 bp Ori: OBQ01880.1 Feature: domain Description: bS6_chloro_cyano Location: 3332-3611 bp Feature: domain Description: bS6_chloro_cyano Location: 3332 -3611 bp Feature: gene Location: 3968-4528 bp Ori: OBQ01967.1 Feature: domain Description: Smc Location: 3986-4430 bp Feature: domain Description: Smc Location: 3986-4430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058), bS6_chloro_cyano (cd15487), Smc (COG1196)

Seq: LJOQ01000025.1 Anabaena sp. AL09 isolate 39864, whole genome shotgun sequence (71512 bp)
Overview 1 RT 1: 48053-57354 bp Neighborhood of RT #1 [48053, 57470] YddA POC1 POC1 GUN4 RVT_N RVT-GII GIIM TIGR04376 Peptidase_M15 Feature: gene Location: 48053-50260 bp Ori: OBQ12659.1 Feature: domain Description: YddA Location: 48197-49793 bp Feature: domain Description: YddA Location: 48197-49793 bp Feature: gene Location: 50723-52396 bp Ori: OBQ12660.1 Feature: domain Description: POC1 Location: 51008-51176 bp Feature: domain Description: POC1 Location: 51008-51176 bp Feature: domain Description: POC1 Location: 51710-51869 bp Feature: domain Description: POC1 Location: 51710-51869 bp Feature: domain Description: GUN4 Location: 51872-52268 bp Feature: domain Description: GUN4 Location: 51872-52268 bp Feature: gene Location: 53862-55355 bp Ori: OBQ12661.1 Feature: domain Description: RVT_N Location: 53898-54144 bp Feature: domain Description: RVT_N Location: 53 898-54144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54195-54852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54195-54852 bp Feature: domain Description: GIIM Note: maturase Location: 54909-55107 bp Feature: domain Description: GIIM Note: maturase Location: 54909-55107 bp Feature: gene Location: 55880-56461 bp Ori: OBQ12662.1 Feature: domain Description: TIGR04376 Location: 55886-56432 bp Feature: domain Description: TIGR043 76 Location: 55886-5643 2 bp Feature: gene Location: 56634-57470 bp Ori: OBQ12677.1 Feature: domain Description: Peptidase_M15 Location: 57075-57354 bp Feature: domain Description: Peptidase_M15 Location: 57075-573 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YddA (COG4178), POC1 (pfam10450), GUN4 (pfam05419), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TIGR04376 (TIGR04376 family protein), Peptidase_M15 (pfam01427)

Seq: LJOQ01000106.1 Anabaena sp. AL09 isolate 39864, whole genome shotgun sequence (190753 bp)
Overview 1 RT 1: 35329-42277 bp Neighborhood of RT #1 [35329, 42282] CbpA TPR DUF1825 RVT_N RVT-GII KOG4768 MrcB PRK05912 Feature: gene Location: 35329-36252 bp Ori: OBQ01369.1 Feature: domain Description: CbpA Location: 35371-35722 bp Feature: domain Description: CbpA Location: 35371-35722 bp Feature: domain Description: TPR Location: 35923-36154 bp Feature: domain Description: TPR Location: 35923-36154 bp Feature: gene Location: 36417-36719 bp Ori: OBQ01370.1 Feature: domain Description: DUF1825 Location: 36420-36711 bp Feature: domain Description: DUF1825 Location: 364 20-36711 bp Feature: gene Location: 37283-38707 bp Ori: OBQ01371.1 Feature: domain Description: RVT_N Location: 37289-37523 bp Feature: domain Description: RVT_N Location: 37289-37523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37574-38231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37574 -38231 bp Feature: domain Description: KOG4768 Location: 38276-38642 bp Feature: domain Description: KOG4 768 Location: 38276-3864 2 bp Feature: gene Location: 38969-40918 bp Ori: OBQ01372.1 Feature: domain Description: MrcB Location: 39071-40889 bp Feature: domain Description: MrcB Location: 39071-4 0889 bp Feature: gene Location: 41092-42282 bp Ori: OBQ01373.1 Feature: domain Description: PRK05912 Location: 41101-42277 bp Feature: domain Description: PRK05912 Location: 4 1101-4 2277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbpA (COG2214), TPR (smart00028), DUF1825 (pfam08855), RVT_N (pfam13655), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), MrcB (COG0744), PRK05912 (tyrosyl-tRNA synthetase; Validated)

Seq: LJOQ01000045.1 Anabaena sp. AL09 isolate 39864, whole genome shotgun sequence (68333 bp)
Overview 1 RT 1: 62525-65744 bp Neighborhood of RT #1 [62525, 65785] RVT-GII GIIM McrA InsQ Feature: gene Location: 62525-63988 bp Ori: OBQ09646.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62594-63263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625 94-63263 bp Feature: domain Description: GIIM Note: maturase Location: 63365-63596 bp Feature: domain Description: GIIM Note: maturase Location: 63365 -635 96 bp Feature: domain Description: McrA Location: 63686-63953 bp Feature: domain Description: McrA Location: 63686-6395 3 bp Feature: gene Location: 64622-65785 bp Ori: OBQ09647.1 Feature: domain Description: InsQ Location: 64625-65744 bp Feature: domain Description: InsQ Location: 64625 -65 744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675)