myRT

myRT report for GCA_001672435.1_AA23

Download annotations/find similar RTs

Seq: LYTP01000012.1 Mesorhizobium sp. AA23 contig_2, whole genome shotgun sequence (895267 bp)
Overview 1 RT 1: 161-6281 bp Neighborhood of RT #1 [161, 6850] RVT-UG28 LepA TadG Feature: gene Location: 161-670 bp Feature: gene Location: 681-1193 bp Feature: gene Location: 1446-2375 bp Ori: OBQ94485.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1449-1677 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1 449-1 677 bp Feature: gene Location: 3556-5361 bp Ori: OBQ94486.1 Feature: domain Description: LepA Location: 3565-5356 bp Feature: domain Description: LepA Location: 3565-5356 bp Feature: gene Location: 5786-6850 bp Ori: OBQ94487.1 Feature: domain Description: TadG Location: 5798-6281 bp Feature: domain Description: TadG Location: 5798-6281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28, LepA (COG0481), TadG (COG4961)

Seq: LYTP01000007.1 Mesorhizobium sp. AA23 contig_15, whole genome shotgun sequence (139312 bp)
Overview 1 RT 1: 21850-26987 bp Neighborhood of RT #1 [21850, 26987] COG3436 NAAAR RVT-GII Feature: gene Location: 21850-23381 bp Feature: domain Description: COG3436 Location: 22093-22567 bp Feature: domain Description: COG3436 Location: 2 2 093-2 2 567 bp Feature: gene Location: 23740-24879 bp Ori: OBQ95792.1 Feature: domain Description: NAAAR Location: 23797-24844 bp Feature: domain Description: NAAAR Location: 2 3797-2 4844 bp Feature: gene Location: 25310-26020 bp Ori: OBQ95793.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25316-25805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5316-2 5805 bp Feature: gene Location: 26459-26671 bp Feature: gene Location: 26694-26987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), NAAAR (cd03317), RVT-GII