myRT

myRT report for GCA_001675225.1_ASM167522v1

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Seq: MAEM01000183.1 Mycobacterium gordonae strain 1245752.6 contig_263, whole genome shotgun sequence (8199 bp)
Overview 1 RT 1: 1735-8172 bp Neighborhood of RT #1 [1735, 8172] COG3653 AcrR RVT-CRISPR-like Feature: gene Location: 1735-3510 bp Ori: OBS02467.1 Feature: domain Description: COG3653 Location: 1741-3472 bp Feature: domain Description: COG3653 Location: 1 741 -3472 bp Feature: gene Location: 3550-4176 bp Ori: OBS02464.1 Feature: domain Description: AcrR Location: 3589-4084 bp Feature: domain Description: AcrR Location: 3589-4084 bp Feature: gene Location: 4337-5710 bp Ori: OBS02465.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4619-5243 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 461 9-5243 bp Feature: gene Location: 5661-7751 bp Feature: gene Location: 7921-8172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3653 (N-acyl-D-aspartate/D-glutamate deacylase ), AcrR (COG1309), RVT-CRISPR

Seq: MAEM01000276.1 Mycobacterium gordonae strain 1245752.6 contig_347, whole genome shotgun sequence (2165 bp)
Overview 1 RT 1: 110-1385 bp Neighborhood of RT #1 [110, 1558] RVT-GII GIIM Feature: gene Location: 110-1558 bp Ori: OBS01476.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 8-1115 bp Feature: domain Description: GIIM Note: maturase Location: 1190-1385 bp Feature: domain Description: GIIM Note: maturase Location: 1190-1385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MAEM01000411.1 Mycobacterium gordonae strain 1245752.6 contig_469, whole genome shotgun sequence (3418 bp)
Overview 1 RT 1: 1-2151 bp Neighborhood of RT #1 [1, 2651] RVT_N RVT-GII GIIM Feature: gene Location: 1-679 bp Feature: gene Location: 864-2651 bp Ori: OBR99818.1 Feature: domain Description: RVT_N Location: 894-1131 bp Feature: domain Description: RVT_N Location: 894-113 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1191-1851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1191-1851 bp Feature: domain Description: GIIM Note: maturase Location: 1920-2151 bp Feature: domain Description: GIIM Note: maturase Location: 1920-2151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MAEM01000524.1 Mycobacterium gordonae strain 1245752.6 contig_570, whole genome shotgun sequence (1337 bp)
Overview 1 RT 1: 119-1046 bp Neighborhood of RT #1 [119, 1201] RVT-GII GIIM Feature: gene Location: 119-1201 bp Ori: OBR98353.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125-755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125-755 bp Feature: domain Description: GIIM Note: maturase Location: 830-1046 bp Feature: domain Description: GIIM Note: maturase Location: 830-104 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)