myRT

myRT report for GCA_001676065.1_ASM167606v1

Download annotations/find similar RTs

Seq: LZFA01000054.1 Photobacterium aquimaris strain GCSL-P87 CFSAN046811_c_P87_5, whole genome shotgun sequence (311185 bp)
Overview 1 RT 1: 3287-10552 bp Neighborhood of RT #1 [3287, 10554] RVT-UG1 PRK09009 Feature: gene Location: 3287-3637 bp Feature: gene Location: 3877-4470 bp Feature: gene Location: 5192-8920 bp Ori: OBU15620.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 5813-6302 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 581 3-6302 bp Feature: gene Location: 8913-9368 bp Feature: gene Location: 9847-10554 bp Ori: OBU15622.1 Feature: domain Description: PRK09009 Location: 9850-10552 bp Feature: domain Description: PRK09009 Location: 9850-1 0552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, PRK09009 (SDR family oxidoreductase)

Seq: LZFA01000027.1 Photobacterium aquimaris strain GCSL-P87 CFSAN046811_c_P87_25, whole genome shotgun sequence (60451 bp)
Overview 1 RT 1: 37648-41046 bp 2 RT 2: 43722-54191 bp Neighborhood of RT #1 [37648, 41046] RVT_N RVT-GII DUF2971 Neighborhood of RT #2 [43722, 54334] PRK15137 SMC_N RVT_N RVT-GII GIIM McrBC Feature: gene Location: 37648-37923 bp Feature: gene Location: 37971-38156 bp Feature: gene Location: 38174-39037 bp Feature: domain Description: RVT_N Location: 38222-38465 bp Feature: domain Description: RVT_N Location: 382 2 2 -38465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38510-39023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38510-3902 3 bp Feature: gene Location: 39779-40597 bp Ori: OBU19997.1 Feature: domain Description: DUF2971 Location: 40103-40391 bp Feature: domain Description: DUF2 971 Location: 40103-40391 bp Feature: gene Location: 40624-41046 bp Feature: gene Location: 43722-44477 bp Ori: OBU20011.1 Feature: domain Description: PRK15137 Location: 43737-44472 bp Feature: domain Description: PRK15137 Location: 43737-44472 bp Feature: gene Location: 44695-47334 bp Ori: OBU20001.1 Feature: domain Description: SMC_N Location: 44941-46816 bp Feature: domain Description: SMC_N Location: 44941-46816 bp Feature: gene Location: 48176-49645 bp Ori: OBU20002.1 Feature: domain Description: RVT_N Location: 48224-48467 bp Feature: domain Description: RVT_N Location: 482 2 4-48467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48512-49136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48512 -49136 bp Feature: domain Description: GIIM Note: maturase Location: 49196-49421 bp Feature: domain Description: GIIM Note: maturase Location: 49196-4942 1 bp Feature: gene Location: 49948-52737 bp Feature: gene Location: 53039-54334 bp Ori: OBU20004.1 Feature: domain Description: McrBC Location: 53204-54191 bp Feature: domain Description: McrBC Location: 532 04-54191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, DUF2971 (pfam11185), PRK15137 (DNA-specific endonuclease I; Provisional), SMC_N (pfam02463), GIIM (pfam08388), McrBC (pfam10117)