myRT

myRT report for GCA_001677055.1_ASM167705v1

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Seq: LILG01000011.1 Bacillus thuringiensis strain BGSC 4BT1 4BT1_contig000011, whole genome shotgun sequence (381584 bp)
Overview 1 RT 1: 104-3585 bp Neighborhood of RT #1 [104, 3587] RVT-GII Intron_maturas2 HNHc SAM_MT YphP_YqiW Feature: gene Location: 104-1921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1 1 99 bp Feature: domain Description: Intron_maturas2 Location: 1277-1571 bp Feature: domain Description: Intron_maturas2 Location: 1 277-1 571 bp Feature: domain Description: HNHc Note: nucleases Location: 1718-1895 bp Feature: domain Description: HNHc Note: nucleases Location: 1 71 8-1 895 bp Feature: gene Location: 2537-3103 bp Feature: domain Description: SAM_MT Location: 2660-3092 bp Feature: domain Description: SAM_MT Location: 2660-3092 bp Feature: gene Location: 3153-3587 bp Feature: domain Description: YphP_YqiW Location: 3177-3585 bp Feature: domain Description: YphP_YqiW Location: 31 77-3585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SAM_MT (pfam04445), YphP_YqiW (TIGR04191)

Seq: LILG01000012.1 Bacillus thuringiensis strain BGSC 4BT1 4BT1_contig000012, whole genome shotgun sequence (61347 bp)
Overview 1 RT 1: 104-3976 bp Neighborhood of RT #1 [104, 3976] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 104-1921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1199 bp Feature: domain Description: Intron_maturas2 Location: 1277-1571 bp Feature: domain Description: Intron_maturas2 Location: 12 77-1571 bp Feature: domain Description: HNHc Note: nucleases Location: 1718-1895 bp Feature: domain Description: HNHc Note: nucleases Location: 1718-1895 bp Feature: gene Location: 2668-3198 bp Feature: gene Location: 3221-3976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: LILG01000013.1 Bacillus thuringiensis strain BGSC 4BT1 4BT1_contig000013, whole genome shotgun sequence (60031 bp)
Overview 1 RT 1: 628-3338 bp Neighborhood of RT #1 [628, 3502] RVT-GII Intron_maturas2 HNHc Imm26 Feature: gene Location: 628-2445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892-1723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892-1723 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-2419 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-2419 bp Feature: gene Location: 2511-2711 bp Feature: gene Location: 2774-3502 bp Feature: domain Description: Imm26 Location: 3029-3338 bp Feature: domain Description: Imm26 Location: 3 029-3 3 3 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Imm26 (pfam15428)

Seq: LILG01000014.1 Bacillus thuringiensis strain BGSC 4BT1 4BT1_contig000014, whole genome shotgun sequence (25473 bp)
Overview 1 RT 1: 628-5389 bp 2 RT 2: 21275-25242 bp Neighborhood of RT #1 [628, 5487] RVT-GII Intron_maturas2 HNHc TraG-D_C xerC Neighborhood of RT #2 [21275, 25358] AAA_10 RVT-GII HNHc Feature: gene Location: 628-2445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892-1723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892-1723 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-2419 bp Feature: domain Description: HNHc Note: nucleases Location: 224 2-24 19 bp Feature: gene Location: 2549-3946 bp Feature: domain Description: TraG-D_C Location: 2693-3056 bp Feature: domain Description: TraG-D_C Location: 2693-3056 bp Feature: gene Location: 4513-5487 bp Feature: domain Description: xerC Location: 4540-5389 bp Feature: domain Description: xerC Location: 4 54 0-5389 bp Feature: gene Location: 21275-22810 bp Feature: domain Description: AAA_10 Location: 22616-22793 bp Feature: domain Description: AAA_10 Location: 22616-22793 bp Feature: gene Location: 22957-23133 bp Feature: gene Location: 23526-25358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23826-24531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23826-24 531 bp Feature: domain Description: HNHc Note: nucleases Location: 25110-25242 bp Feature: domain Description: HNHc Note: nucleases Location: 25110-2524 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), xerC (PRK01287), AAA_10 (pfam12846)

Seq: LILG01000015.1 Bacillus thuringiensis strain BGSC 4BT1 4BT1_contig000015, whole genome shotgun sequence (220672 bp)
Overview 1 RT 1: 628-4757 bp Neighborhood of RT #1 [628, 4759] RVT-GII Intron_maturas2 HNHc PRK12451 Feature: gene Location: 628-2445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892-1723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892-1723 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-2419 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-2419 bp Feature: gene Location: 2603-2770 bp Feature: gene Location: 3071-4759 bp Feature: domain Description: PRK12451 Location: 3074-4757 bp Feature: domain Description: PRK1245 1 Location: 3074-475 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK12451 (arginyl-tRNA synthetase; Reviewed)

Seq: LILG01000018.1 Bacillus thuringiensis strain BGSC 4BT1 4BT1_contig000018, whole genome shotgun sequence (702045 bp)
Overview 1 RT 1: 698993-701814 bp Neighborhood of RT #1 [698993, 701930] amiF RVT-GII HNHc Feature: gene Location: 698993-699382 bp Feature: domain Description: amiF Location: 698996-699368 bp Feature: domain Description: amiF Location: 6 98996 -6 9936 8 bp Feature: gene Location: 699529-699705 bp Feature: gene Location: 700098-701930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700398-701103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700398-701103 bp Feature: domain Description: HNHc Note: nucleases Location: 701682-701814 bp Feature: domain Description: HNHc Note: nucleases Location: 7016 82-701814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT amiF (PRK13287), RVT-GII, HNHc (smart00507)

Seq: LILG01000030.1 Bacillus thuringiensis strain BGSC 4BT1 4BT1_contig000030, whole genome shotgun sequence (243575 bp)
Overview 1 RT 1: 239853-243406 bp Neighborhood of RT #1 [239853, 243406] YugN amiF RVT-GII HNHc Feature: gene Location: 239853-240218 bp Feature: domain Description: YugN Location: 239871-240129 bp Feature: domain Description: YugN Location: 23987 1-240129 bp Feature: gene Location: 240265-240888 bp Feature: domain Description: amiF Location: 240268-240883 bp Feature: domain Description: amiF Location: 240268-240883 bp Feature: gene Location: 241005-242837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241305-242010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241305-242010 bp Feature: domain Description: HNHc Note: nucleases Location: 242589-242721 bp Feature: domain Description: HNHc Note: nucleases Location: 242589-2427 21 bp Feature: gene Location: 243230-243406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YugN (pfam08868), amiF (PRK13287), RVT-GII, HNHc (smart00507)

Seq: LILG01000041.1 Bacillus thuringiensis strain BGSC 4BT1 4BT1_contig000041, whole genome shotgun sequence (60825 bp)
Overview 1 RT 1: 41058-47493 bp 2 RT 2: 55079-60696 bp Neighborhood of RT #1 [41058, 47493] DUF3854 RVT-GII GIIM HNHc Neighborhood of RT #2 [55079, 60722] Replic_Relax RVT-GII Intron_maturas2 HNHc Feature: gene Location: 41058-41288 bp Feature: gene Location: 41784-43055 bp Feature: domain Description: DUF3854 Location: 42702-43023 bp Feature: domain Description: DUF38 54 Location: 42702-43023 bp Feature: gene Location: 43060-44847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43318-44017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43318 -44017 bp Feature: domain Description: GIIM Note: maturase Location: 44101-44344 bp Feature: domain Description: GIIM Note: maturase Location: 44101-44344 bp Feature: domain Description: HNHc Note: nucleases Location: 44590-44728 bp Feature: domain Description: HNHc Note: nucleases Location: 44590-44728 bp Feature: gene Location: 45624-45767 bp Feature: gene Location: 45943-47493 bp Feature: gene Location: 55079-56629 bp Feature: domain Description: Replic_Relax Location: 55175-55898 bp Feature: domain Description: Replic_Relax Location: 55175-558 98 bp Feature: gene Location: 56601-58289 bp Feature: gene Location: 58905-60722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59169-60000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59169-60000 bp Feature: domain Description: Intron_maturas2 Location: 60078-60372 bp Feature: domain Description: Intron_maturas2 Location: 60078 -60372 bp Feature: domain Description: HNHc Note: nucleases Location: 60519-60696 bp Feature: domain Description: HNHc Note: nucleases Location: 60519-60696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Replic_Relax (pfam13814), Intron_maturas2 (pfam01348)

Seq: LILG01000045.1 Bacillus thuringiensis strain BGSC 4BT1 4BT1_contig000045, whole genome shotgun sequence (184703 bp)
Overview 1 RT 1: 52792-56814 bp 2 RT 2: 180513-184534 bp Neighborhood of RT #1 [52792, 56843] Methyltransf_25 RVT-GII ACR3 Neighborhood of RT #2 [180513, 184534] AAA_10 RVT-GII HNHc Feature: gene Location: 52792-53160 bp Feature: gene Location: 53394-54122 bp Feature: domain Description: Methyltransf_25 Location: 53523-53799 bp Feature: domain Description: Methyltransf_25 Location: 53523-5379 9 bp Feature: gene Location: 55191-55586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55257-55494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55257-5549 4 bp Feature: gene Location: 55999-56259 bp Feature: gene Location: 56673-56843 bp Feature: domain Description: ACR3 Location: 56685-56814 bp Feature: domain Description: ACR3 Location: 56685-56814 bp Feature: gene Location: 180513-180995 bp Feature: gene Location: 180997-181875 bp Feature: domain Description: AAA_10 Location: 181003-181759 bp Feature: domain Description: AAA_10 Location: 181003-181759 bp Feature: gene Location: 182133-183965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182433-183138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182433-183138 bp Feature: domain Description: HNHc Note: nucleases Location: 183717-183849 bp Feature: domain Description: HNHc Note: nucleases Location: 183717-183849 bp Feature: gene Location: 184358-184534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_25 (pfam13649), RVT-GII, ACR3 (COG0798), AAA_10 (pfam12846), HNHc (smart00507)