myRT

myRT report for GCA_001679805.1_ASM167980v1

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Seq: MAPZ01000019.1 Clostridium paraputrificum strain 373-A1 CP373A1_26, whole genome shotgun sequence (597845 bp)
Overview 1 RT 1: 386244-392891 bp Neighborhood of RT #1 [386244, 392992] HTH_19 TPR TPR TPR HTH_XRE TPR_12 TPR_12 TPR_12 TPR RVT-GII GIIM Cauli_VI RNase_HI_bacteria_like YkvA Feature: gene Location: 386244-387506 bp Feature: domain Description: HTH_19 Location: 386265-386451 bp Feature: domain Description: HTH_1 9 Location: 386265-386451 bp Feature: domain Description: TPR Location: 386685-386898 bp Feature: domain Description: TPR Location: 386685-386898 bp Feature: domain Description: TPR Location: 387063-387366 bp Feature: domain Description: TPR Location: 387063-387366 bp Feature: domain Description: TPR Location: 387414-387489 bp Feature: domain Description: TPR Location: 38741 4-387489 bp Feature: gene Location: 387526-388827 bp Feature: domain Description: HTH_XRE Location: 387547-387715 bp Feature: domain Description: HTH_XRE Location: 387547-38771 5 bp Feature: domain Description: TPR_12 Location: 387751-387940 bp Feature: domain Description: TPR_1 2 Location: 387751 -387940 bp Feature: domain Description: TPR_12 Location: 387997-388183 bp Feature: domain Description: TPR_1 2 Location: 387997-3881 83 bp Feature: domain Description: TPR_12 Location: 388237-388450 bp Feature: domain Description: TPR_1 2 Location: 388237-388450 bp Feature: domain Description: TPR Location: 388477-388786 bp Feature: domain Description: TPR Location: 388477-388786 bp Feature: gene Location: 389297-390654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389633-390251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389633-390251 bp Feature: domain Description: GIIM Note: maturase Location: 390305-390458 bp Feature: domain Description: GIIM Note: maturase Location: 390305-390458 bp Feature: gene Location: 391380-392024 bp Feature: domain Description: Cauli_VI Location: 391389-391524 bp Feature: domain Description: Cauli_VI Location: 391 389-391 524 bp Feature: domain Description: RNase_HI_bacteria_like Location: 391614-392010 bp Feature: domain Description: RNase_HI_bacteria_like Location: 391 61 4-39201 0 bp Feature: gene Location: 392039-392992 bp Feature: domain Description: YkvA Location: 392615-392891 bp Feature: domain Description: YkvA Location: 39261 5-392891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_19 (pfam12844), TPR (smart00028), HTH_XRE (smart00530), TPR_12 (pfam13424), RVT-GII, GIIM (pfam08388), Cauli_VI (pfam01693), RNase_HI_bacteria_like (cd09277), YkvA (COG3339)