myRT

myRT report for GCA_001680695.1_ASM168069v1

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Seq: MAIS01000016.1 Paenibacillus sp. KS1 NODE_77_length_84528_cov_58.430237, whole genome shotgun sequence (84558 bp)
Overview 1 RT 1: 78292-84034 bp Neighborhood of RT #1 [78292, 84192] PDC1_DGC_like Tar ATH1 RVT-GII GIIM Feature: gene Location: 78292-80302 bp Feature: domain Description: PDC1_DGC_like Location: 78637-78856 bp Feature: domain Description: PDC1 _DGC_like Location: 78637-78856 bp Feature: domain Description: Tar Location: 79093-79708 bp Feature: domain Description: Tar Location: 79093-79708 bp Feature: gene Location: 80384-82690 bp Ori: OBY80182.1 Feature: domain Description: ATH1 Location: 80408-82658 bp Feature: domain Description: ATH1 Location: 80408-82658 bp Feature: gene Location: 82801-84192 bp Ori: OBY80183.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83143-83761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 831 43-83761 bp Feature: domain Description: GIIM Note: maturase Location: 83812-84034 bp Feature: domain Description: GIIM Note: maturase Location: 8381 2-84034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDC1_DGC_like (cd12914), Tar (COG0840), ATH1 (COG1554), RVT-GII, GIIM (pfam08388)

Seq: MAIS01000006.1 Paenibacillus sp. KS1 NODE_72_length_115091_cov_52.348984, whole genome shotgun sequence (115121 bp)
Overview 1 RT 1: 41237-46583 bp Neighborhood of RT #1 [41237, 46618] PRK05420 RVT-GII GIIM PEP_hydrolase PRK02399 Feature: gene Location: 41237-41476 bp Feature: gene Location: 41778-42461 bp Ori: OBY80932.1 Feature: domain Description: PRK05420 Location: 41793-42453 bp Feature: domain Description: PRK0542 0 Location: 41793-42 453 bp Feature: gene Location: 42552-43952 bp Ori: OBY80933.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42864-43491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 864-43491 bp Feature: domain Description: GIIM Note: maturase Location: 43551-43776 bp Feature: domain Description: GIIM Note: maturase Location: 43551-43776 bp Feature: gene Location: 44541-45377 bp Ori: OBY80934.1 Feature: domain Description: PEP_hydrolase Location: 44565-45360 bp Feature: domain Description: PEP_hydrolase Location: 44565-45360 bp Feature: gene Location: 45374-46618 bp Ori: OBY80935.1 Feature: domain Description: PRK02399 Location: 45380-46583 bp Feature: domain Description: PRK02 399 Location: 45380-46583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05420 (aquaporin Z; Provisional), RVT-GII, GIIM (pfam08388), PEP_hydrolase (pfam09370), PRK02399 (hypothetical protein; Provisional)

Seq: MAIS01000011.1 Paenibacillus sp. KS1 NODE_29_length_93017_cov_45.685360, whole genome shotgun sequence (93047 bp)
Overview 1 RT 1: 47614-53520 bp Neighborhood of RT #1 [47614, 53531] HTH_MARR PRK08244 RVT-GII PRK12747 WecG Feature: gene Location: 47614-48135 bp Ori: OBY80528.1 Feature: domain Description: HTH_MARR Location: 47755-48055 bp Feature: domain Description: HTH_MARR Location: 47755-48055 bp Feature: gene Location: 48304-49800 bp Ori: OBY80529.1 Feature: domain Description: PRK08244 Location: 48307-49795 bp Feature: domain Description: PRK08244 Location: 483 07-49795 bp Feature: gene Location: 50186-51199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50192-50615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50192-50615 bp Feature: gene Location: 51755-52519 bp Ori: OBY80530.1 Feature: domain Description: PRK12747 Location: 51767-52517 bp Feature: domain Description: PRK12747 Location: 51767-52517 bp Feature: gene Location: 52803-53531 bp Ori: OBY80570.1 Feature: domain Description: WecG Location: 52809-53520 bp Feature: domain Description: WecG Location: 52809-53 520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MARR (smart00347), PRK08244 (monooxygenase), RVT-GII, PRK12747 (short chain dehydrogenase; Provisional), WecG (COG1922)