myRT

myRT report for GCA_001683915.1_ASM168391v1

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Seq: LXTT01000115.1 Muricauda sp. CP2A contig-6000013, whole genome shotgun sequence (8582 bp)
Overview 1 RT 1: 42-4861 bp Neighborhood of RT #1 [42, 4980] GALNS_like RVT-GII GIIM SusD Feature: gene Location: 42-1496 bp Feature: domain Description: GALNS_like Location: 171-1398 bp Feature: domain Description: GALNS_like Location: 1 71 -1 398 bp Feature: gene Location: 1682-3016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1883-2543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 883-2543 bp Feature: domain Description: GIIM Note: maturase Location: 2624-2831 bp Feature: domain Description: GIIM Note: maturase Location: 2624-2831 bp Feature: gene Location: 3016-3552 bp Feature: gene Location: 3553-4980 bp Feature: domain Description: SusD Location: 3769-4861 bp Feature: domain Description: SusD Location: 3769-4861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), SusD (NF033071), GALNS_like (cd16026)

Seq: LXTT01000008.1 Muricauda sp. CP2A contig-7000000, whole genome shotgun sequence (4168 bp)
Overview 1 RT 1: 48-4165 bp Neighborhood of RT #1 [48, 4165] RVT-Retrons rpsB Feature: gene Location: 48-1322 bp Feature: gene Location: 1527-2582 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1710-2322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1710-2 32 2 bp Feature: gene Location: 2859-4004 bp Feature: domain Description: rpsB Location: 2871-3603 bp Feature: domain Description: rpsB Location: 2 871-3603 bp Feature: gene Location: 4016-4165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, rpsB (PRK12311)