myRT

myRT report for GCA_001692215.1_ASM169221v1

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Seq: LXKQ01000073.1 Agrobacterium sp. B133/95 AS1E6_8, whole genome shotgun sequence (435053 bp)
Overview 1 RT 1: 383730-389538 bp Neighborhood of RT #1 [383730, 389538] NT_2-5OAS_ClassI-CCAase PRK13300 HTH_3 ImmA RVT-UG12 DUF4393 Feature: gene Location: 383730-384674 bp Ori: OCJ14907.1 Feature: domain Description: NT_2-5OAS_ClassI-CCAase Location: 383799-384231 bp Feature: domain Description: NT_2-5OAS_ClassI-CCAase Location: 383799-384231 bp Feature: domain Description: PRK13300 Location: 384396-384582 bp Feature: domain Description: PRK1 3300 Location: 384396-384582 bp Feature: gene Location: 384848-385903 bp Ori: OCJ14908.1 Feature: domain Description: HTH_3 Location: 384866-385028 bp Feature: domain Description: HTH_3 Location: 384866-385028 bp Feature: domain Description: ImmA Location: 385235-385736 bp Feature: domain Description: ImmA Location: 385235-385736 bp Feature: gene Location: 386077-387810 bp Ori: OCJ14909.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 386398-386851 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 386398-386851 bp Feature: gene Location: 387838-388602 bp Ori: OCJ14910.1 Feature: domain Description: DUF4393 Location: 388033-388585 bp Feature: domain Description: DUF4393 Location: 388033-388585 bp Feature: gene Location: 388627-389538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NT_2-5OAS_ClassI-CCAase (cd05400), PRK13300 (CCA tRNA nucleotidyltransferase), HTH_3 (pfam01381), ImmA (COG2856), RVT-UG12, DUF4393 (pfam14337)

Seq: LXKQ01000031.1 Agrobacterium sp. B133/95 AS1E6_27, whole genome shotgun sequence (39937 bp)
Overview 1 RT 1: 970-5270 bp Neighborhood of RT #1 [970, 5275] InsE PHA02517 RVT-GII GIIM PHA02517 mob_myst_A Feature: gene Location: 970-1239 bp Ori: OCJ23614.1 Feature: domain Description: InsE Location: 982-1231 bp Feature: domain Description: InsE Location: 982 -12 31 bp Feature: gene Location: 1236-1643 bp Feature: domain Description: PHA02517 Location: 1302-1644 bp Feature: domain Description: PHA02 517 Location: 1302 -1644 bp Feature: gene Location: 2306-3820 bp Ori: OCJ23615.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2564-3299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 564-32 99 bp Feature: domain Description: GIIM Note: maturase Location: 3371-3578 bp Feature: domain Description: GIIM Note: maturase Location: 3371-3578 bp Feature: gene Location: 3885-4346 bp Feature: domain Description: PHA02517 Location: 3891-4335 bp Feature: domain Description: PHA02 517 Location: 3891-4335 bp Feature: gene Location: 4814-5275 bp Ori: OCJ23616.1 Feature: domain Description: mob_myst_A Location: 4832-5270 bp Feature: domain Description: mob_myst_A Location: 4832 -52 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), mob_myst_A (TIGR02612)

Seq: LXKQ01000071.1 Agrobacterium sp. B133/95 AS1E6_7, whole genome shotgun sequence (466701 bp)
Overview 1 RT 1: 224604-228973 bp Neighborhood of RT #1 [224604, 229044] Rve RVT-GII GIIM Rve OYE_like_FMN Feature: gene Location: 224604-224849 bp Feature: gene Location: 225284-225745 bp Feature: domain Description: Rve Location: 225290-225671 bp Feature: domain Description: Rve Location: 225290-225671 bp Feature: gene Location: 225808-227067 bp Ori: OCJ15478.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226012-226669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226012-226669 bp Feature: domain Description: GIIM Note: maturase Location: 226750-226981 bp Feature: domain Description: GIIM Note: maturase Location: 226750-226981 bp Feature: gene Location: 227599-227847 bp Feature: domain Description: Rve Location: 227626-227842 bp Feature: domain Description: Rve Location: 227626-227842 bp Feature: gene Location: 227962-229044 bp Ori: OCJ15479.1 Feature: domain Description: OYE_like_FMN Location: 227977-228973 bp Feature: domain Description: OYE_like_FMN Location: 227977-228973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), OYE_like_FMN (cd02933)