myRT

myRT report for GCA_001692955.1_ASM169295v1

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Seq: LYBN01000036.1 Enterococcus faecalis strain UCD-PD3 scaffold_40, whole genome shotgun sequence (21997 bp)
Overview 1 RT 1: 2990-7085 bp 2 RT 2: 17911-20672 bp Neighborhood of RT #1 [2990, 7126] Relaxase PemK_toxin RVT-Retrons SR_ResInv HTH_Hin_like Neighborhood of RT #2 [17911, 21287] PolY_Pol_V_umuC RVT-GII Feature: gene Location: 2990-4291 bp Feature: domain Description: Relaxase Location: 3029-3734 bp Feature: domain Description: Relaxase Location: 3029-3734 bp Feature: gene Location: 4342-4707 bp Feature: domain Description: PemK_toxin Location: 4369-4696 bp Feature: domain Description: PemK_toxin Location: 4369-4696 bp Feature: gene Location: 4813-5778 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4948-5503 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4948-5503 bp Feature: gene Location: 5759-6040 bp Feature: gene Location: 6548-7126 bp Feature: domain Description: SR_ResInv Location: 6554-6926 bp Feature: domain Description: SR_ResInv Location: 6554-6926 bp Feature: domain Description: HTH_Hin_like Location: 6968-7085 bp Feature: domain Description: HTH_Hin_like Location: 6968-7085 bp Feature: gene Location: 17911-18282 bp Feature: gene Location: 18306-19544 bp Feature: domain Description: PolY_Pol_V_umuC Location: 18345-19353 bp Feature: domain Description: PolY_Pol_V_umuC Location: 1 8345-1 9353 bp Feature: gene Location: 19625-21287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19934-20672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9934-20672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), PemK_toxin (pfam02452), RVT-Retrons, SR_ResInv (cd03768), HTH_Hin_like (cd00569), PolY_Pol_V_umuC (cd01700), RVT-GII