myRT

myRT report for GCA_001693735.1_ASM169373v1

Download annotations/find similar RTs

Seq: LWDV01000009.1 Orenia metallireducens strain Z6 2524618312, whole genome shotgun sequence (903334 bp)
Overview 1 RT 1: 733278-739851 bp Neighborhood of RT #1 [733278, 740054] fn3 FN3 pfam03781 T_den_put_tspse RVT_N RVT-GII GIIM NADase_NGA Feature: gene Location: 733278-735080 bp Feature: domain Description: fn3 Location: 733404-733605 bp Feature: domain Description: fn3 Location: 733404-733605 bp Feature: domain Description: FN3 Location: 734055-734280 bp Feature: domain Description: FN3 Location: 734055-734280 bp Feature: domain Description: pfam03781 Location: 734358-735063 bp Feature: domain Description: pfam03781 Location: 734358-735063 bp Feature: gene Location: 735523-736422 bp Feature: domain Description: T_den_put_tspse Location: 735550-736417 bp Feature: domain Description: T_den_put_tspse Location: 735550-73641 7 bp Feature: gene Location: 736664-738130 bp Feature: RT Description: RVT_N Location: 736736-736970 bp Feature: RT Description: RVT_N Location: 736736-736970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737024-737681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737024-737681 bp Feature: domain Description: GIIM Note: maturase Location: 737735-737966 bp Feature: domain Description: GIIM Note: maturase Location: 737735-737966 bp Feature: gene Location: 738882-739277 bp Feature: gene Location: 739278-740054 bp Feature: domain Description: NADase_NGA Location: 739419-739851 bp Feature: domain Description: NADase_NGA Location: 73941 9-739851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fn3 (pfam00041), FN3 (smart00060), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), NADase_NGA (pfam07461)

Seq: LWDV01000001.1 Orenia metallireducens strain Z6 2524618303, whole genome shotgun sequence (2157 bp)
Overview 1 RT 1: 122-1424 bp Neighborhood of RT #1 [122, 1588] RVT_N RVT-GII GIIM Feature: gene Location: 122-1588 bp Feature: RT Description: RVT_N Location: 194-428 bp Feature: RT Description: RVT_N Location: 194-42 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 482-1139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 482 -1139 bp Feature: domain Description: GIIM Note: maturase Location: 1193-1424 bp Feature: domain Description: GIIM Note: maturase Location: 1193-142 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LWDV01000010.1 Orenia metallireducens strain Z6 2524618313, whole genome shotgun sequence (837414 bp)
Overview 1 RT 1: 72595-78850 bp Neighborhood of RT #1 [72595, 78867] Asp_protease_2 RVT_N RVT-GII GIIM Pentapeptide_3 Pentapeptide_3 Pentapeptide_3 Ion_trans_2 PRK00110 Feature: gene Location: 72595-72975 bp Feature: domain Description: Asp_protease_2 Location: 72640-72913 bp Feature: domain Description: Asp_protease_2 Location: 72640-72913 bp Feature: gene Location: 72965-73219 bp Feature: gene Location: 73489-74955 bp Feature: RT Description: RVT_N Location: 73561-73795 bp Feature: RT Description: RVT_N Location: 73 561-73 795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73849-74506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 849-74506 bp Feature: domain Description: GIIM Note: maturase Location: 74560-74791 bp Feature: domain Description: GIIM Note: maturase Location: 74560-74791 bp Feature: gene Location: 75718-77487 bp Feature: domain Description: Pentapeptide_3 Location: 76132-76267 bp Feature: domain Description: Pentapeptide_3 Location: 7613 2-76267 bp Feature: domain Description: Pentapeptide_3 Location: 76294-76396 bp Feature: domain Description: Pentapeptide_3 Location: 76294-763 96 bp Feature: domain Description: Pentapeptide_3 Location: 76555-76669 bp Feature: domain Description: Pentapeptide_3 Location: 76555-76669 bp Feature: domain Description: Ion_trans_2 Location: 77197-77479 bp Feature: domain Description: Ion_trans_2 Location: 77197-77479 bp Feature: gene Location: 78103-78867 bp Feature: domain Description: PRK00110 Location: 78106-78850 bp Feature: domain Description: PRK00110 Location: 78106-78850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asp_protease_2 (pfam13650), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Pentapeptide_3 (pfam13576), Ion_trans_2 (pfam07885), PRK00110 (YebC/PmpR family DNA-binding transcriptional regulator)