myRT

myRT report for GCA_001694315.1_ASM169431v1

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Seq: MAWI01000032.1 Streptococcus agalactiae strain BE-PW-058 NODE_3_length_225972_cov_62.8514_ID_5, whole genome shotgun sequence (225972 bp)
Overview 1 RT 1: 172019-181312 bp Neighborhood of RT #1 [172019, 181320] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc SF2_C_SNF TnpV Feature: gene Location: 172019-172570 bp Feature: gene Location: 172620-178082 bp Feature: domain Description: N6_Mtase Location: 174633-175224 bp Feature: domain Description: N6_Mtase Location: 1 74633-1 75224 bp Feature: domain Description: COG4646 Location: 175815-177939 bp Feature: domain Description: COG4646 Location: 1 7581 5-1 77939 bp Feature: gene Location: 178582-180360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 178843-179635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 78843-1 79635 bp Feature: domain Description: Intron_maturas2 Location: 179740-179971 bp Feature: domain Description: Intron_maturas2 Location: 1 79740-1 79971 bp Feature: domain Description: HNHc Note: nucleases Location: 180136-180322 bp Feature: domain Description: HNHc Note: nucleases Location: 1 801 36-1 80322 bp Feature: gene Location: 180498-180965 bp Feature: domain Description: SF2_C_SNF Location: 180741-180888 bp Feature: domain Description: SF2_C_SNF Location: 1 80741 -1 80888 bp Feature: gene Location: 180946-181320 bp Feature: domain Description: TnpV Location: 180982-181312 bp Feature: domain Description: TnpV Location: 1 80982-1 81 31 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793), TnpV (pfam14198)