myRT

myRT report for GCA_001695775.1_ASM169577v1

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Seq: LXRN01000016.1 Klebsiella pneumoniae strain MB361 NODE_20, whole genome shotgun sequence (88788 bp)
Overview 1 RT 1: 8892-13260 bp Neighborhood of RT #1 [8892, 13260] PRK13889 RVT-Retrons HTH_XRE Feature: gene Location: 8892-9203 bp Feature: gene Location: 10001-11503 bp Feature: domain Description: PRK13889 Location: 10004-10586 bp Feature: domain Description: PRK1 3889 Location: 1 0004-1 0586 bp Feature: gene Location: 11580-12680 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11721-12273 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 721 -1 2273 bp Feature: gene Location: 12673-12954 bp Feature: domain Description: HTH_XRE Location: 12688-12853 bp Feature: domain Description: HTH_XRE Location: 1 2688-1 2853 bp Feature: gene Location: 13045-13260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, HTH_XRE (smart00530)

Seq: LXRN01000025.1 Klebsiella pneumoniae strain MB361 NODE_29, whole genome shotgun sequence (51309 bp)
Overview 1 RT 1: 36058-40915 bp Neighborhood of RT #1 [36058, 40917] HTH_17 PHA02517 RVT-GII GIIM PHA02517 PFDH_like Feature: gene Location: 36058-36339 bp Feature: domain Description: HTH_17 Location: 36085-36229 bp Feature: domain Description: HTH_17 Location: 36085-362 2 9 bp Feature: gene Location: 36419-36883 bp Feature: domain Description: PHA02517 Location: 36482-36818 bp Feature: domain Description: PHA02 517 Location: 36482 -36818 bp Feature: gene Location: 37471-38994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37744-38476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37744-38476 bp Feature: domain Description: GIIM Note: maturase Location: 38554-38749 bp Feature: domain Description: GIIM Note: maturase Location: 38554-38749 bp Feature: gene Location: 39171-39551 bp Feature: domain Description: PHA02517 Location: 39174-39543 bp Feature: domain Description: PHA02 517 Location: 39174-39543 bp Feature: gene Location: 39784-40917 bp Feature: domain Description: PFDH_like Location: 39787-40915 bp Feature: domain Description: PFDH_like Location: 39787-40915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PFDH_like (cd08282)

Seq: LXRN01000031.1 Klebsiella pneumoniae strain MB361 NODE_37, whole genome shotgun sequence (29937 bp)
Overview 1 RT 1: 15111-18380 bp Neighborhood of RT #1 [15111, 18394] DUF1472 RVT-GII PRK10276 Feature: gene Location: 15111-15557 bp Feature: domain Description: DUF1472 Location: 15288-15501 bp Feature: domain Description: DUF1472 Location: 15288-15501 bp Feature: gene Location: 15616-15846 bp Feature: gene Location: 16080-17567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16485-17175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16485-17175 bp Feature: gene Location: 17618-17851 bp Feature: gene Location: 17969-18394 bp Feature: domain Description: PRK10276 Location: 17972-18380 bp Feature: domain Description: PRK10276 Location: 17972-183 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)