myRT

myRT report for GCA_001696085.1_ASM169608v1

Download annotations/find similar RTs

Seq: LHBC01000014.1 Vibrio parahaemolyticus strain CFSAN018760 K1068_S9_L001_R1_001_(paired)_contig_14, whole genome shotgun sequence (116918 bp)
Overview 1 RT 1: 22570-30582 bp Neighborhood of RT #1 [22570, 30593] HTH_36 SSL2 RVT-UG15 Phage_int_SAM_3 INT_C_like_1 PRK08719 Feature: gene Location: 22570-23430 bp Ori: OCP73396.1 Feature: domain Description: HTH_36 Location: 22654-22810 bp Feature: domain Description: HTH_36 Location: 22654-2281 0 bp Feature: gene Location: 23948-25813 bp Ori: OCP73397.1 Feature: domain Description: SSL2 Location: 23981-25313 bp Feature: domain Description: SSL2 Location: 23981 -2531 3 bp Feature: gene Location: 26388-27983 bp Ori: OCP73398.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 26799-27201 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 26799-27201 bp Feature: gene Location: 28246-30045 bp Ori: OCP73399.1 Feature: domain Description: Phage_int_SAM_3 Location: 29029-29194 bp Feature: domain Description: Phage_int_SAM_3 Location: 29029-291 94 bp Feature: domain Description: INT_C_like_1 Location: 29425-29962 bp Feature: domain Description: INT_C_like_1 Location: 29425-29962 bp Feature: gene Location: 30096-30593 bp Ori: OCP73400.1 Feature: domain Description: PRK08719 Location: 30141-30582 bp Feature: domain Description: PRK0871 9 Location: 301 41 -30582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), SSL2 (COG1061), RVT-UG15, Phage_int_SAM_3 (pfam14659), INT_C_like_1 (cd01184), PRK08719 (ribonuclease H; Reviewed)