myRT

myRT report for GCA_001696715.1_ASM169671v1

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Seq: MBFM01000001.1 Thauera phenolivorans strain ZV1C Scaffold1, whole genome shotgun sequence (751136 bp)
Overview 1 RT 1: 95454-99992 bp 2 RT 2: 273409-277063 bp 3 RT 3: 496497-501342 bp 4 RT 4: 653820-661316 bp Neighborhood of RT #1 [95454, 100039] MoxR COG3825 RVT-GII GIIM MarR Neighborhood of RT #2 [273409, 277071] rpsI rplM RVT-GII GIIM PRK10738 Neighborhood of RT #3 [496497, 501350] PRK05724 PerM RVT-GII GIIM YccA_like Neighborhood of RT #4 [653820, 661321] PRK08955 ACCS Acetyltransf_1 RVT-GII GIIM PA_CoA_Oxy5 PA_CoA_Oxy4 Feature: gene Location: 95454-96305 bp Feature: domain Description: MoxR Location: 95466-96213 bp Feature: domain Description: MoxR Location: 95466-9621 3 bp Feature: gene Location: 96316-97491 bp Feature: domain Description: COG3825 Location: 96319-97483 bp Feature: domain Description: COG3825 Location: 9631 9-97483 bp Feature: gene Location: 97607-99064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98030-98645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98030-98645 bp Feature: domain Description: GIIM Note: maturase Location: 98702-98906 bp Feature: domain Description: GIIM Note: maturase Location: 98702-98906 bp Feature: gene Location: 98270-99043 bp Feature: gene Location: 99428-100039 bp Feature: domain Description: MarR Location: 99623-99992 bp Feature: domain Description: MarR Location: 99623-99992 bp Feature: gene Location: 273409-273876 bp Feature: domain Description: rpsI Location: 273496-273874 bp Feature: domain Description: rpsI Location: 273496-273874 bp Feature: gene Location: 273816-274244 bp Feature: domain Description: rplM Location: 273819-274242 bp Feature: domain Description: rplM Location: 27381 9-274242 bp Feature: gene Location: 274450-275907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274873-275488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274873-275488 bp Feature: domain Description: GIIM Note: maturase Location: 275545-275749 bp Feature: domain Description: GIIM Note: maturase Location: 275545-275749 bp Feature: gene Location: 275113-275886 bp Feature: gene Location: 276652-277071 bp Feature: domain Description: PRK10738 Location: 276655-277063 bp Feature: domain Description: PRK1 0738 Location: 276655-277063 bp Feature: gene Location: 496497-497462 bp Feature: domain Description: PRK05724 Location: 496503-497451 bp Feature: domain Description: PRK05724 Location: 496503-497451 bp Feature: gene Location: 497525-498751 bp Feature: domain Description: PerM Location: 497654-498701 bp Feature: domain Description: PerM Location: 497654-498701 bp Feature: gene Location: 498865-500322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 499288-499903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 499288-499903 bp Feature: domain Description: GIIM Note: maturase Location: 499960-500164 bp Feature: domain Description: GIIM Note: maturase Location: 499960-5001 64 bp Feature: gene Location: 499528-500301 bp Feature: gene Location: 500685-501350 bp Feature: domain Description: YccA_like Location: 500736-501342 bp Feature: domain Description: YccA_like Location: 500736-501 342 bp Feature: gene Location: 653820-654842 bp Feature: domain Description: PRK08955 Location: 653823-654825 bp Feature: domain Description: PRK08955 Location: 653823-654825 bp Feature: gene Location: 654966-657635 bp Feature: domain Description: ACCS Location: 654981-656847 bp Feature: domain Description: ACCS Location: 654981 -656847 bp Feature: domain Description: Acetyltransf_1 Location: 657300-657573 bp Feature: domain Description: Acetyltransf_1 Location: 657300-657573 bp Feature: gene Location: 657825-659081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 658017-658635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65801 7-658635 bp Feature: domain Description: GIIM Note: maturase Location: 658683-658914 bp Feature: domain Description: GIIM Note: maturase Location: 658683-65891 4 bp Feature: gene Location: 659707-660804 bp Feature: domain Description: PA_CoA_Oxy5 Location: 659725-660796 bp Feature: domain Description: PA_CoA_Oxy5 Location: 659725-660796 bp Feature: gene Location: 660821-661321 bp Feature: domain Description: PA_CoA_Oxy4 Location: 660869-661316 bp Feature: domain Description: PA_CoA_Oxy4 Location: 660869-661 31 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MoxR (COG0714), COG3825 (CoxE;Uncharacterized conserved protein, contains von Willebrand factor type A (vWA) domain ), RVT-GII, GIIM (pfam08388), MarR (pfam01047), rpsI (PRK00132), rplM (PRK09216), PRK10738 (OsmC family protein), PRK05724 (acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated), PerM (COG0628)
YccA_like (cd10433), PRK08955 (glyceraldehyde-3-phosphate dehydrogenase; Validated), ACCS (COG1042), Acetyltransf_1 (pfam00583), PA_CoA_Oxy5 (TIGR02160), PA_CoA_Oxy4 (TIGR02159)

Seq: MBFM01000003.1 Thauera phenolivorans strain ZV1C Scaffold3, whole genome shotgun sequence (649317 bp)
Overview 1 RT 1: 441020-447378 bp 2 RT 2: 644540-648820 bp Neighborhood of RT #1 [441020, 447378] polynuc_phos RVT-GII GIIM dksA Neighborhood of RT #2 [644540, 648978] PRK10787 RVT-GII GIIM Feature: gene Location: 441020-443119 bp Feature: domain Description: polynuc_phos Location: 441053-443096 bp Feature: domain Description: polynuc_phos Location: 441053-443096 bp Feature: gene Location: 443512-444285 bp Feature: gene Location: 443596-444948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443914-444529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443914-44452 9 bp Feature: domain Description: GIIM Note: maturase Location: 444586-444790 bp Feature: domain Description: GIIM Note: maturase Location: 444586-444790 bp Feature: gene Location: 445081-445506 bp Feature: domain Description: dksA Location: 445114-445501 bp Feature: domain Description: dksA Location: 445114-445501 bp Feature: gene Location: 446113-447378 bp Feature: gene Location: 644540-646927 bp Feature: domain Description: PRK10787 Location: 644543-646844 bp Feature: domain Description: PRK10787 Location: 644543-646844 bp Feature: gene Location: 647542-648315 bp Feature: gene Location: 647626-648978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 647944-648559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 647944-648559 bp Feature: domain Description: GIIM Note: maturase Location: 648616-648820 bp Feature: domain Description: GIIM Note: maturase Location: 648616-64882 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT polynuc_phos (TIGR03591), RVT-GII, GIIM (pfam08388), dksA (TIGR02420), PRK10787 (DNA-binding ATP-dependent protease La; Provisional)

Seq: MBFM01000005.1 Thauera phenolivorans strain ZV1C Scaffold5, whole genome shotgun sequence (620134 bp)
Overview 1 RT 1: 178280-182189 bp Neighborhood of RT #1 [178280, 182206] CytC5 RVT-GII GIIM HicA_toxin YfdV Feature: gene Location: 178280-178744 bp Feature: domain Description: CytC5 Location: 178346-178700 bp Feature: domain Description: CytC5 Location: 1783 46-178700 bp Feature: gene Location: 179107-179880 bp Feature: gene Location: 179191-180543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179509-180124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179509-180124 bp Feature: domain Description: GIIM Note: maturase Location: 180181-180385 bp Feature: domain Description: GIIM Note: maturase Location: 180181-1803 85 bp Feature: gene Location: 180638-180913 bp Feature: domain Description: HicA_toxin Location: 180707-180866 bp Feature: domain Description: HicA_toxin Location: 180707-180866 bp Feature: gene Location: 181268-182206 bp Feature: domain Description: YfdV Location: 181274-182189 bp Feature: domain Description: YfdV Location: 181274-182189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CytC5 (COG3245), RVT-GII, GIIM (pfam08388), HicA_toxin (pfam07927), YfdV (COG0679)