myRT

myRT report for GCA_001696775.1_ASM169677v1

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Seq: MAJK01000138.1 Escherichia coli strain MCR1_NJ 6, whole genome shotgun sequence (156515 bp)
Overview 1 RT 1: 127698-133807 bp Neighborhood of RT #1 [127698, 133866] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 127698-128618 bp Ori: OCQ46332.1 Feature: domain Description: AbiEii Location: 127740-128481 bp Feature: domain Description: AbiEii Location: 1 27740-1 28481 bp Feature: gene Location: 128605-129387 bp Ori: OCQ46333.1 Feature: domain Description: AbiEi_3_N Location: 128617-128878 bp Feature: domain Description: AbiEi_3_N Location: 1 2861 7-1 28878 bp Feature: domain Description: AbiEi_3 Location: 128890-129346 bp Feature: domain Description: AbiEi_3 Location: 1 28890-1 29346 bp Feature: gene Location: 129703-132912 bp Ori: OCQ46334.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130231-130720 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 30231 -1 30720 bp Feature: domain Description: nitrilase Location: 132226-132823 bp Feature: domain Description: nitrilase Location: 1 32226-1 32823 bp Feature: gene Location: 133259-133729 bp Feature: gene Location: 133726-133866 bp Ori: OCQ46336.1 Feature: domain Description: SfsB Location: 133735-133807 bp Feature: domain Description: SfsB Location: 1 33735-1 33807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)

Seq: MAJK01000014.1 Escherichia coli strain MCR1_NJ 110, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 278-703 bp Feature: gene Location: 672-2180 bp Ori: OCQ49779.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MAJK01000121.1 Escherichia coli strain MCR1_NJ 44, whole genome shotgun sequence (37752 bp)
Overview 1 RT 1: 6433-12824 bp Neighborhood of RT #1 [6433, 12850] YesN YesN YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 6433-7488 bp Ori: OCQ46898.1 Feature: domain Description: YesN Location: 6436-6835 bp Feature: domain Description: YesN Location: 643 6-683 5 bp Feature: domain Description: YesN Location: 7168-7465 bp Feature: domain Description: YesN Location: 7168-7465 bp Feature: gene Location: 7505-8734 bp Ori: OCQ46899.1 Feature: domain Description: YesM Location: 7985-8726 bp Feature: domain Description: YesM Location: 7985-8726 bp Feature: gene Location: 9317-9838 bp Ori: OCQ46900.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9323-9605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 23 -9605 bp Feature: domain Description: GIIM Note: maturase Location: 9653-9833 bp Feature: domain Description: GIIM Note: maturase Location: 9653 -983 3 bp Feature: gene Location: 9866-10405 bp Ori: OCQ46901.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10196-10274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10196-10274 bp Feature: gene Location: 10891-11796 bp Feature: gene Location: 11933-12850 bp Ori: OCQ46903.1 Feature: domain Description: PFLE_PFLC Location: 11969-12824 bp Feature: domain Description: PFLE_PFLC Location: 11969-12824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesN (COG4753), YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)