myRT

myRT report for GCA_001698435.1_ASM169843v1

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Seq: MBRD01000033.1 Nostoc sp. MBR 210 contig_6, whole genome shotgun sequence (844704 bp)
Overview 1 RT 1: 107454-115993 bp Neighborhood of RT #1 [107454, 116061] DUF2555 YpfH RVT-UG19 B_ant_repeat B_ant_repeat Beta_helix Big_6 OmpA Feature: gene Location: 107454-107666 bp Ori: OCQ89688.1 Feature: domain Description: DUF2555 Location: 107481-107640 bp Feature: domain Description: DUF2555 Location: 1 07481 -1 07640 bp Feature: gene Location: 107820-108440 bp Ori: OCQ89689.1 Feature: domain Description: YpfH Location: 107841-108432 bp Feature: domain Description: YpfH Location: 1 07841 -1 08432 bp Feature: gene Location: 108681-111104 bp Ori: OCQ89690.1 Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 109056-109536 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 1 09056-1 09536 bp Feature: gene Location: 111202-113838 bp Ori: OCQ89691.1 Feature: domain Description: B_ant_repeat Location: 112918-113038 bp Feature: domain Description: B_ant_repeat Location: 1 1 291 8-1 1 3038 bp Feature: domain Description: B_ant_repeat Location: 113491-113611 bp Feature: domain Description: B_ant_repeat Location: 1 1 3491 -1 1 361 1 bp Feature: gene Location: 113908-116061 bp Ori: OCQ90218.1 Feature: domain Description: Beta_helix Location: 114667-115069 bp Feature: domain Description: Beta_helix Location: 1 1 4667-1 1 5069 bp Feature: domain Description: Big_6 Location: 115273-115522 bp Feature: domain Description: Big_6 Location: 1 1 5273-1 1 5522 bp Feature: domain Description: OmpA Location: 115546-115993 bp Feature: domain Description: OmpA Location: 1 1 5546-1 1 5993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2555 (pfam10742), YpfH (COG0400), RVT-UG19, B_ant_repeat (TIGR01451), Beta_helix (pfam13229), Big_6 (pfam17936), OmpA (pfam00691)

Seq: MBRD01000004.1 Nostoc sp. MBR 210 contig_12, whole genome shotgun sequence (569903 bp)
Overview 1 RT 1: 432737-440775 bp Neighborhood of RT #1 [432737, 440783] ABC2_membrane_3 RVT-Retrons Ribonuc_L-PSP CotJC Feature: gene Location: 432737-434647 bp Ori: OCQ99032.1 Feature: domain Description: ABC2_membrane_3 Location: 432884-433649 bp Feature: domain Description: ABC2 _membrane_3 Location: 432 884-433649 bp Feature: gene Location: 434858-436570 bp Feature: gene Location: 437296-438336 bp Ori: OCQ99034.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 437479-438091 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 437479-438091 bp Feature: gene Location: 439401-439973 bp Ori: OCQ99035.1 Feature: domain Description: Ribonuc_L-PSP Location: 439590-439941 bp Feature: domain Description: Ribonuc_L-PSP Location: 439590-439941 bp Feature: gene Location: 440088-440783 bp Ori: OCQ99036.1 Feature: domain Description: CotJC Location: 440091-440775 bp Feature: domain Description: CotJC Location: 440091-440775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC2_membrane_3 (pfam12698), RVT-Retrons, Ribonuc_L-PSP (pfam01042), CotJC (COG3546)