myRT

myRT report for GCA_001699025.1_ASM169902v1

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Seq: JTGO01000050.1 Klebsiella pneumoniae strain XH213 contig-100_50, whole genome shotgun sequence (3350 bp)
Overview 1 RT 1: 943-3200 bp Neighborhood of RT #1 [943, 3295] RVT-GII GIIM MobC Feature: gene Location: 943-2292 bp Ori: OCR75392.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1225-1843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 225-1 843 bp Feature: domain Description: GIIM Note: maturase Location: 1891-2095 bp Feature: domain Description: GIIM Note: maturase Location: 1 891 -2095 bp Feature: gene Location: 3029-3295 bp Ori: OCR75393.1 Feature: domain Description: MobC Location: 3080-3200 bp Feature: domain Description: MobC Location: 3080-3200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MobC (pfam05713)

Seq: JTGO01000006.1 Klebsiella pneumoniae strain XH213 contig-100_5, whole genome shotgun sequence (271060 bp)
Overview 1 RT 1: 36955-43870 bp Neighborhood of RT #1 [36955, 43875] PRK00872 PRK09678 RVT-UG17 SLATT_5 PRK11462 Feature: gene Location: 36955-37422 bp Ori: OCR82451.1 Feature: domain Description: PRK00872 Location: 36961-37417 bp Feature: domain Description: PRK00872 Location: 36961-37417 bp Feature: gene Location: 37552-37755 bp Ori: OCR82452.1 Feature: domain Description: PRK09678 Location: 37597-37729 bp Feature: domain Description: PRK09678 Location: 37597-3772 9 bp Feature: gene Location: 38660-40069 bp Ori: OCR82453.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38897-39509 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38897-39509 bp Feature: gene Location: 40264-40905 bp Ori: OCR82651.1 Feature: domain Description: SLATT_5 Location: 40267-40870 bp Feature: domain Description: SLATT_5 Location: 402 67-40870 bp Feature: gene Location: 42481-43875 bp Ori: OCR82454.1 Feature: domain Description: PRK11462 Location: 42484-43870 bp Feature: domain Description: PRK11462 Location: 42 484-43870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00872 (hypothetical protein; Provisional), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG17, SLATT_5 (pfam18160), PRK11462 (putative transporter; Provisional)

Seq: JTGO01000023.1 Klebsiella pneumoniae strain XH213 contig-100_22, whole genome shotgun sequence (77577 bp)
Overview 1 RT 1: 67593-72630 bp Neighborhood of RT #1 [67593, 72635] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 67593-68018 bp Ori: OCR78277.1 Feature: domain Description: Antirestrict Location: 67728-68016 bp Feature: domain Description: Antirestrict Location: 67728-68016 bp Feature: gene Location: 68538-68768 bp Feature: gene Location: 69002-70534 bp Ori: OCR78279.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69404-70142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69404-70142 bp Feature: gene Location: 70939-71364 bp Ori: OCR78280.1 Feature: domain Description: PRK10276 Location: 70942-71350 bp Feature: domain Description: PRK10276 Location: 70942-713 50 bp Feature: gene Location: 71364-72635 bp Ori: OCR78281.1 Feature: domain Description: umuC Location: 71367-72630 bp Feature: domain Description: umuC Location: 713 67-7263 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)