myRT

myRT report for GCA_001699095.1_ASM169909v1

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Seq: JUBE01000054.1 Klebsiella pneumoniae strain XH216 contig-100_54, whole genome shotgun sequence (3350 bp)
Overview 1 RT 1: 943-3200 bp Neighborhood of RT #1 [943, 3295] RVT-GII GIIM MobC Feature: gene Location: 943-2292 bp Ori: OCR65210.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1225-1843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 225-1 843 bp Feature: domain Description: GIIM Note: maturase Location: 1891-2095 bp Feature: domain Description: GIIM Note: maturase Location: 1 891 -2095 bp Feature: gene Location: 3029-3295 bp Ori: OCR65211.1 Feature: domain Description: MobC Location: 3080-3200 bp Feature: domain Description: MobC Location: 3080-3200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MobC (pfam05713)

Seq: JUBE01000009.1 Klebsiella pneumoniae strain XH216 contig-100_8, whole genome shotgun sequence (234636 bp)
Overview 1 RT 1: 190762-197677 bp Neighborhood of RT #1 [190762, 197682] PRK11462 SLATT_5 RVT-UG17 PRK09678 PRK00872 Feature: gene Location: 190762-192156 bp Ori: OCR71927.1 Feature: domain Description: PRK11462 Location: 190765-192151 bp Feature: domain Description: PRK11462 Location: 190765-192 151 bp Feature: gene Location: 193732-194373 bp Ori: OCR71974.1 Feature: domain Description: SLATT_5 Location: 193735-194338 bp Feature: domain Description: SLATT_5 Location: 193735-194338 bp Feature: gene Location: 194568-195977 bp Ori: OCR71928.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 194805-195417 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 194805-195417 bp Feature: gene Location: 196882-197085 bp Ori: OCR71929.1 Feature: domain Description: PRK09678 Location: 196927-197059 bp Feature: domain Description: PRK09678 Location: 19692 7-197059 bp Feature: gene Location: 197215-197682 bp Ori: OCR71930.1 Feature: domain Description: PRK00872 Location: 197221-197677 bp Feature: domain Description: PRK00872 Location: 1972 2 1-197677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11462 (putative transporter; Provisional), SLATT_5 (pfam18160), RVT-UG17, PRK09678 (DNA-binding transcriptional regulator; Provisional), PRK00872 (hypothetical protein; Provisional)

Seq: JUBE01000025.1 Klebsiella pneumoniae strain XH216 contig-100_24, whole genome shotgun sequence (77577 bp)
Overview 1 RT 1: 67593-72630 bp Neighborhood of RT #1 [67593, 72635] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 67593-68018 bp Ori: OCR67958.1 Feature: domain Description: Antirestrict Location: 67728-68016 bp Feature: domain Description: Antirestrict Location: 67728-68016 bp Feature: gene Location: 68538-68768 bp Feature: gene Location: 69002-70534 bp Ori: OCR67959.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69404-70142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69404-70142 bp Feature: gene Location: 70939-71364 bp Ori: OCR67960.1 Feature: domain Description: PRK10276 Location: 70942-71350 bp Feature: domain Description: PRK10276 Location: 70942-713 50 bp Feature: gene Location: 71364-72635 bp Ori: OCR67961.1 Feature: domain Description: umuC Location: 71367-72630 bp Feature: domain Description: umuC Location: 713 67-7263 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)