myRT

myRT report for GCA_001699855.1_ASM169985v1

Download annotations/find similar RTs

Seq: LIDT01000012.1 Bacteroides fragilis strain 20793-3 contig00012, whole genome shotgun sequence (317671 bp)
Overview 1 RT 1: 105125-114084 bp Neighborhood of RT #1 [105125, 114092] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 105125-107314 bp Ori: OCR34235.1 Feature: domain Description: GlnA3 Location: 105200-107312 bp Feature: domain Description: GlnA3 Location: 1 05200-1 0731 2 bp Feature: gene Location: 107618-109774 bp Feature: gene Location: 109981-111093 bp Ori: OCR34237.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 110296-110845 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 0296-1 1 0845 bp Feature: gene Location: 111235-113028 bp Ori: OCR34238.1 Feature: domain Description: rpsA Location: 111313-112921 bp Feature: domain Description: rpsA Location: 1 1 1 31 3-1 1 2921 bp Feature: gene Location: 113178-114092 bp Ori: OCR34239.1 Feature: domain Description: RNase_Z Location: 113193-114084 bp Feature: domain Description: RNase_Z Location: 1 1 31 93-1 1 4084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: LIDT01000025.1 Bacteroides fragilis strain 20793-3 contig00025, whole genome shotgun sequence (190126 bp)
Overview 1 RT 1: 140165-144870 bp Neighborhood of RT #1 [140165, 145190] RVT-DGRs YhgE Feature: gene Location: 140165-140395 bp Feature: gene Location: 140572-140982 bp Feature: gene Location: 140996-142339 bp Ori: OCR31202.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 141206-141797 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1412 06-141797 bp Feature: gene Location: 142841-144277 bp Feature: gene Location: 144291-145190 bp Ori: OCR31204.1 Feature: domain Description: YhgE Location: 144477-144870 bp Feature: domain Description: YhgE Location: 144477-144870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, YhgE (COG1511)