myRT

myRT report for GCA_001699875.1_ASM169987v1

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Seq: LIDU01000035.1 Bacteroides fragilis strain 20656-2-1 contig00034, whole genome shotgun sequence (39721 bp)
Overview 1 RT 1: 27421-34119 bp Neighborhood of RT #1 [27421, 35324] INT_RitA_C_like COG4646 RVT_N RVT-GII GIIM KAP_NTPase KAP_NTPase Feature: gene Location: 27421-28632 bp Feature: domain Description: INT_RitA_C_like Location: 28054-28588 bp Feature: domain Description: INT_RitA_C_like Location: 28054-28588 bp Feature: gene Location: 28777-29790 bp Feature: domain Description: COG4646 Location: 28783-29173 bp Feature: domain Description: COG4646 Location: 28783-291 73 bp Feature: gene Location: 30447-32120 bp Feature: RT Description: RVT_N Location: 30501-30744 bp Feature: RT Description: RVT_N Location: 30501 -30744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30789-31437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30789-31 437 bp Feature: domain Description: GIIM Note: maturase Location: 31491-31722 bp Feature: domain Description: GIIM Note: maturase Location: 31 491 -31 722 bp Feature: gene Location: 32117-33196 bp Feature: gene Location: 33435-35324 bp Feature: domain Description: KAP_NTPase Location: 33483-33567 bp Feature: domain Description: KAP_NTPase Location: 33483-33567 bp Feature: domain Description: KAP_NTPase Location: 33855-34119 bp Feature: domain Description: KAP_NTPase Location: 33855-341 1 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitA_C_like (cd01188), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693)

Seq: LIDU01000014.1 Bacteroides fragilis strain 20656-2-1 contig00014, whole genome shotgun sequence (128923 bp)
Overview 1 RT 1: 103103-112061 bp Neighborhood of RT #1 [103103, 112069] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 103103-105292 bp Feature: domain Description: GlnA3 Location: 103178-105290 bp Feature: domain Description: GlnA3 Location: 103178-1052 90 bp Feature: gene Location: 105595-107751 bp Feature: gene Location: 107958-109070 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108273-108822 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1082 73-10882 2 bp Feature: gene Location: 109212-111005 bp Feature: domain Description: rpsA Location: 109290-110898 bp Feature: domain Description: rpsA Location: 1092 90-110898 bp Feature: gene Location: 111155-112069 bp Feature: domain Description: RNase_Z Location: 111170-112061 bp Feature: domain Description: RNase_Z Location: 111170-112 061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)