myRT

myRT report for GCA_001701175.1_ASM170117v1

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Seq: DAAM01000002.1 TPA_asm: Bacteroidales bacterium H1 H1_contig_130, whole genome shotgun sequence (31222 bp)
Overview 1 RT 1: 20491-27215 bp Neighborhood of RT #1 [20491, 27244] Mob_Pre Smc KOG0110 RVT-UG3 PRK15483 N6_N4_Mtase T3RM_EcoP15I_C Feature: gene Location: 20491-22041 bp Feature: domain Description: Mob_Pre Location: 20899-21214 bp Feature: domain Description: Mob_Pre Location: 20899-21 21 4 bp Feature: domain Description: Smc Location: 21220-21505 bp Feature: domain Description: Smc Location: 21 220-21 505 bp Feature: gene Location: 22255-22527 bp Feature: gene Location: 22544-23248 bp Feature: domain Description: KOG0110 Location: 22565-22886 bp Feature: domain Description: KOG01 1 0 Location: 22565-22886 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 22994-23234 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 22994-23234 bp Feature: gene Location: 23416-26382 bp Feature: domain Description: PRK15483 Location: 23419-26377 bp Feature: domain Description: PRK1 5483 Location: 2341 9-26377 bp Feature: gene Location: 26384-27244 bp Feature: domain Description: N6_N4_Mtase Location: 26441-26759 bp Feature: domain Description: N6_N4_Mtase Location: 26441 -26759 bp Feature: domain Description: T3RM_EcoP15I_C Location: 26930-27215 bp Feature: domain Description: T3RM_EcoP1 5I_C Location: 26930-2721 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mob_Pre (pfam01076), Smc (COG1196), KOG0110 (KOG0110, RNA-binding protein (RRM superfamily) ), RVT-UG3, PRK15483 (type III restriction-modification system endonuclease), N6_N4_Mtase (pfam01555), T3RM_EcoP15I_C (pfam18273)