myRT

myRT report for GCA_001701625.1_ASM170162v1

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Seq: LYWR01000021.1 Klebsiella pneumoniae strain SKLX2836 WGC048080D_contig_28, whole genome shotgun sequence (20173 bp)
Overview 1 RT 1: 6243-11283 bp Neighborhood of RT #1 [6243, 11285] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 6243-7514 bp Ori: OCV69204.1 Feature: domain Description: umuC Location: 6246-7509 bp Feature: domain Description: umuC Location: 6246-7509 bp Feature: gene Location: 7514-7939 bp Ori: OCV69205.1 Feature: domain Description: PRK10276 Location: 7517-7925 bp Feature: domain Description: PRK1 0276 Location: 751 7-7925 bp Feature: gene Location: 8344-9876 bp Ori: OCV69206.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8746-9484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8746-9484 bp Feature: gene Location: 10110-10340 bp Feature: gene Location: 10860-11285 bp Ori: OCV69207.1 Feature: domain Description: Antirestrict Location: 10995-11283 bp Feature: domain Description: Antirestrict Location: 1 0995-1 1 283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: LYWR01000015.1 Klebsiella pneumoniae strain SKLX2836 WGC048080D_contig_22, whole genome shotgun sequence (307212 bp)
Overview 1 RT 1: 42525-51225 bp Neighborhood of RT #1 [42525, 51242] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 42525-43238 bp Ori: OCV70840.1 Feature: domain Description: YqgA Location: 42531-43233 bp Feature: domain Description: YqgA Location: 42 531-432 33 bp Feature: gene Location: 43844-45082 bp Feature: domain Description: PRK09692 Location: 43850-45032 bp Feature: domain Description: PRK09692 Location: 43850-45032 bp Feature: gene Location: 45759-47840 bp Ori: OCV70841.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 46170-46614 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 46170-46614 bp Feature: gene Location: 47837-50431 bp Ori: OCV71090.1 Feature: domain Description: FimD Location: 47879-50420 bp Feature: domain Description: FimD Location: 47879-5042 0 bp Feature: gene Location: 50478-51242 bp Ori: OCV70842.1 Feature: domain Description: FimC Location: 50523-51225 bp Feature: domain Description: FimC Location: 5052 3-512 2 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)