myRT

myRT report for GCA_001701765.1_ASM170176v1

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Seq: LYWU01000035.1 Klebsiella pneumoniae strain SKLX2891 WGC048086D_contig_4, whole genome shotgun sequence (750903 bp)
Overview 1 RT 1: 747189-750450 bp Neighborhood of RT #1 [747189, 750842] GT9_LPS_heptosyltransferase DinI RVT-GII Feature: gene Location: 747189-748328 bp Ori: OCV84551.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 747372-748272 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 747372-748272 bp Feature: gene Location: 748499-748741 bp Ori: OCV84552.1 Feature: domain Description: DinI Location: 748550-748730 bp Feature: domain Description: DinI Location: 748550-748730 bp Feature: gene Location: 749358-750842 bp Ori: OCV84553.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749760-750450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749760-750450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII

Seq: LYWU01000040.1 Klebsiella pneumoniae strain SKLX2891 WGC048086D_contig_45, whole genome shotgun sequence (20204 bp)
Overview 1 RT 1: 121-2947 bp Neighborhood of RT #1 [121, 3057] RVT-GII GIIM PHA02517 HTH_17 Feature: gene Location: 121-1644 bp Ori: OCV83188.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-112 6 bp Feature: domain Description: GIIM Note: maturase Location: 1204-1399 bp Feature: domain Description: GIIM Note: maturase Location: 12 04-1399 bp Feature: gene Location: 2232-2471 bp Ori: OCV83203.1 Feature: domain Description: PHA02517 Location: 2235-2406 bp Feature: domain Description: PHA02 517 Location: 2 2 35-2 406 bp Feature: gene Location: 2776-3057 bp Ori: OCV83204.1 Feature: domain Description: HTH_17 Location: 2803-2947 bp Feature: domain Description: HTH_17 Location: 2 803-2 947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), HTH_17 (pfam12728)