myRT

myRT report for GCA_001702405.1_ASM170240v1

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Seq: MCGW01000015.1 Klebsiella pneumoniae strain CCBH15949 scaffold15.1, whole genome shotgun sequence (191416 bp)
Overview 1 RT 1: 108243-111894 bp Neighborhood of RT #1 [108243, 111894] DDE_Tnp_1_5 RVT-GII Feature: gene Location: 108243-109211 bp Feature: domain Description: DDE_Tnp_1_5 Location: 108345-108678 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 1 08345-1 08678 bp Feature: gene Location: 109768-111255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110173-110863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 01 73-1 1 0863 bp Feature: gene Location: 111332-111568 bp Feature: gene Location: 111760-111894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_5 (pfam13737), RVT-GII

Seq: MCGW01000017.1 Klebsiella pneumoniae strain CCBH15949 scaffold17.1, whole genome shotgun sequence (147589 bp)
Overview 1 RT 1: 2-8413 bp Neighborhood of RT #1 [2, 8442] Beta_protein RVT-UG5 PRK04247 RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Feature: gene Location: 2-751 bp Feature: domain Description: Beta_protein Location: 20-746 bp Feature: domain Description: Beta_protein Location: 2 0-746 bp Feature: gene Location: 1296-1469 bp Feature: gene Location: 2416-5433 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2914-3409 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 914-3409 bp Feature: gene Location: 5613-6713 bp Feature: domain Description: PRK04247 Location: 5676-5907 bp Feature: domain Description: PRK042 47 Location: 5676-5907 bp Feature: gene Location: 6724-8442 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 7051-7585 bp Feature: domain Description: RMtype1_S_Ppo2 1ORF8840P_TRD1-CR1_like Location: 7051-7585 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 8035-8413 bp Feature: domain Description: RMtype1_S_Ppo2 1ORF8840P_TRD1-CR1_like Location: 8035-8413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Beta_protein (pfam14350), RVT-UG5, PRK04247 (endonuclease NucS), RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293)