myRT

myRT report for GCA_001703865.1_ASM170386v1

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Seq: MBLR01000165.1 Lactobacillus reuteri strain 482_46 contig_77, whole genome shotgun sequence (12356 bp)
Overview 1 RT 1: 1911-10525 bp Neighborhood of RT #1 [1911, 10525] prfC KxYKxGKxW glucan_65_rpt glucan_65_rpt glucan_65_rpt glucan_65_rpt glucan_65_rpt glucan_65_rpt Lreu_0056_like RVT-GII GIIM KxYKxGKxW glucan_65_rpt glucan_65_rpt glucan_65_rpt glucan_65_rpt glucan_65_rpt GanB Feature: gene Location: 1911-3488 bp Feature: domain Description: prfC Location: 1926-3483 bp Feature: domain Description: prfC Location: 1 926-3483 bp Feature: gene Location: 3557-5248 bp Feature: domain Description: KxYKxGKxW Location: 3563-3629 bp Feature: domain Description: KxYKxGKxW Location: 3563-3629 bp Feature: domain Description: glucan_65_rpt Location: 3875-4004 bp Feature: domain Description: glucan_65_rpt Location: 3875-4004 bp Feature: domain Description: glucan_65_rpt Location: 4019-4205 bp Feature: domain Description: glucan_65_rpt Location: 401 9-4205 bp Feature: domain Description: glucan_65_rpt Location: 4328-4454 bp Feature: domain Description: glucan_65_rpt Location: 4328-4454 bp Feature: domain Description: glucan_65_rpt Location: 4454-4577 bp Feature: domain Description: glucan_65_rpt Location: 4454-4577 bp Feature: domain Description: glucan_65_rpt Location: 4580-4706 bp Feature: domain Description: glucan_65_rpt Location: 4580-4706 bp Feature: domain Description: glucan_65_rpt Location: 4793-4871 bp Feature: domain Description: glucan_65_rpt Location: 4793-4871 bp Feature: domain Description: Lreu_0056_like Location: 4904-5234 bp Feature: domain Description: Lreu_0056_like Location: 4904-5234 bp Feature: gene Location: 5754-7136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6072-6690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6072-6690 bp Feature: domain Description: GIIM Note: maturase Location: 6744-6972 bp Feature: domain Description: GIIM Note: maturase Location: 6744-6972 bp Feature: gene Location: 7295-8333 bp Feature: domain Description: KxYKxGKxW Location: 7307-7373 bp Feature: domain Description: KxYKxGKxW Location: 7307-7373 bp Feature: domain Description: glucan_65_rpt Location: 7706-7772 bp Feature: domain Description: glucan_65_rpt Location: 7706-7772 bp Feature: domain Description: glucan_65_rpt Location: 7778-7892 bp Feature: domain Description: glucan_65_rpt Location: 7778-7892 bp Feature: domain Description: glucan_65_rpt Location: 7913-8093 bp Feature: domain Description: glucan_65_rpt Location: 791 3-8093 bp Feature: domain Description: glucan_65_rpt Location: 8099-8216 bp Feature: domain Description: glucan_65_rpt Location: 8099-821 6 bp Feature: domain Description: glucan_65_rpt Location: 8225-8321 bp Feature: domain Description: glucan_65_rpt Location: 8225-8321 bp Feature: gene Location: 9151-10525 bp Feature: domain Description: GanB Location: 9487-10525 bp Feature: domain Description: GanB Location: 9487-1 0525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), KxYKxGKxW (TIGR03715), glucan_65_rpt (TIGR04035), Lreu_0056_like (cd15778), RVT-GII, GIIM (pfam08388), GanB (COG3867)

Seq: MBLR01000111.1 Lactobacillus reuteri strain 482_46 contig_28, whole genome shotgun sequence (36836 bp)
Overview 1 RT 1: 23948-30556 bp Neighborhood of RT #1 [23948, 30570] KxYKxGKxW Surf_Exclu_PgrA Surf_Exclu_PgrA group_II_RT_mat RVT-GII AL_MDR HxlR Feature: gene Location: 23948-26500 bp Feature: domain Description: KxYKxGKxW Location: 23984-24050 bp Feature: domain Description: KxYKxGKxW Location: 2 3984-2 4050 bp Feature: domain Description: Surf_Exclu_PgrA Location: 24104-24323 bp Feature: domain Description: Surf_Exclu_PgrA Location: 2 4104-2 432 3 bp Feature: domain Description: Surf_Exclu_PgrA Location: 24809-25733 bp Feature: domain Description: Surf_Exclu_PgrA Location: 2 4809-2 5733 bp Feature: gene Location: 26687-27322 bp Feature: gene Location: 27865-28503 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 27976-28102 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 7976-2 8102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28297-28504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 97-2 8504 bp Feature: gene Location: 29034-30056 bp Feature: domain Description: AL_MDR Location: 29037-30039 bp Feature: domain Description: AL_MDR Location: 2 9037-30039 bp Feature: gene Location: 30226-30570 bp Feature: domain Description: HxlR Location: 30259-30556 bp Feature: domain Description: HxlR Location: 302 59-30556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KxYKxGKxW (TIGR03715), Surf_Exclu_PgrA (TIGR04320), group_II_RT_mat (TIGR04416), RVT-GII, AL_MDR (cd08252), HxlR (pfam01638)

Seq: MBLR01000175.1 Lactobacillus reuteri strain 482_46 contig_86, whole genome shotgun sequence (1170 bp)
Overview 1 RT 1: 10-1006 bp Neighborhood of RT #1 [10, 1170] RVT-GII GIIM Feature: gene Location: 10-1170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106-724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106-724 bp Feature: domain Description: GIIM Note: maturase Location: 778-1006 bp Feature: domain Description: GIIM Note: maturase Location: 778-1006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)