myRT

myRT report for GCA_001706425.1_ASM170642v1

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Seq: MDIN01000044.1 Acinetobacter pittii strain UKK-0549 SRR3547540.ctg000044, whole genome shotgun sequence (43254 bp)
Overview 1 RT 1: 5657-11652 bp Neighborhood of RT #1 [5657, 11684] DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 5657-7033 bp Feature: gene Location: 7304-7522 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 7388-7499 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 7388-7499 bp Feature: gene Location: 7636-9297 bp Feature: RT Description: RVT_N Location: 7681-7924 bp Feature: RT Description: RVT_N Location: 7681 -7924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7969-8605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7969-8605 bp Feature: domain Description: GIIM Note: maturase Location: 8659-8890 bp Feature: domain Description: GIIM Note: maturase Location: 8659-8890 bp Feature: gene Location: 9874-11274 bp Feature: domain Description: LZ_Tnp_IS66 Location: 10066-10291 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 0066-1 0291 bp Feature: domain Description: zf-IS66 Location: 10315-10441 bp Feature: domain Description: zf-IS66 Location: 1 031 5-1 0441 bp Feature: domain Description: DDE_Tnp_IS66 Location: 10483-11275 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 0483-1 1 275 bp Feature: gene Location: 11349-11684 bp Feature: domain Description: TnpB_IS66 Location: 11367-11652 bp Feature: domain Description: TnpB_IS66 Location: 1 1 367-1 1 652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)