myRT

myRT report for GCA_001706555.1_ASM170655v1

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Seq: MDIC01000094.1 Acinetobacter pittii strain UKK-0539 SRR3547529.ctg000094, whole genome shotgun sequence (209658 bp)
Overview 1 RT 1: 119987-125068 bp Neighborhood of RT #1 [119987, 125068] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 119987-120322 bp Feature: domain Description: TnpB_IS66 Location: 120005-120293 bp Feature: domain Description: TnpB_IS66 Location: 1 20005-1 20293 bp Feature: gene Location: 120397-121776 bp Feature: domain Description: LZ_Tnp_IS66 Location: 120568-120793 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 20568-1 20793 bp Feature: domain Description: zf-IS66 Location: 120817-120943 bp Feature: domain Description: zf-IS66 Location: 1 2081 7-1 20943 bp Feature: domain Description: DDE_Tnp_IS66 Location: 120985-121777 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 20985-1 21 777 bp Feature: gene Location: 122353-124014 bp Feature: RT Description: RVT_N Location: 122398-122641 bp Feature: RT Description: RVT_N Location: 1 22398-1 22641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122686-123322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 22686-1 23322 bp Feature: domain Description: GIIM Note: maturase Location: 123376-123607 bp Feature: domain Description: GIIM Note: maturase Location: 1 23376-1 23607 bp Feature: gene Location: 124128-124346 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 124212-124323 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 2421 2-1 24323 bp Feature: gene Location: 124568-125068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)