myRT

myRT report for GCA_001707915.1_ASM170791v1

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Seq: MAVV01000019.1 Thermodesulfovibrio sp. N1 contig00019, whole genome shotgun sequence (31594 bp)
Overview 1 RT 1: 6673-12639 bp Neighborhood of RT #1 [6673, 12668] PHA00653 Avd_like RVT-DGRs P-type_ATPase_Ca_prok KOG0202 PGPGW Feature: gene Location: 6673-7752 bp Ori: ODA44245.1 Feature: domain Description: PHA00653 Location: 6808-7750 bp Feature: domain Description: PHA00653 Location: 6808-7750 bp Feature: gene Location: 7960-8112 bp Ori: ODA44246.1 Feature: domain Description: Avd_like Location: 7966-8107 bp Feature: domain Description: Avd_like Location: 7966-81 07 bp Feature: gene Location: 8376-9389 bp Ori: ODA44247.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8589-9177 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8589-91 77 bp Feature: gene Location: 9747-12398 bp Ori: ODA44248.1 Feature: domain Description: P-type_ATPase_Ca_prok Location: 9810-11976 bp Feature: domain Description: P-type_ATPase_Ca_prok Location: 981 0-1 1 976 bp Feature: domain Description: KOG0202 Location: 12096-12381 bp Feature: domain Description: KOG0202 Location: 1 2096-1 2381 bp Feature: gene Location: 12444-12668 bp Ori: ODA44249.1 Feature: domain Description: PGPGW Location: 12486-12639 bp Feature: domain Description: PGPGW Location: 1 2486-1 2639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, P-type_ATPase_Ca_prok (cd02089), KOG0202 (KOG0202, Ca2+ transporting ATPase ), PGPGW (pfam09656)

Seq: MAVV01000023.1 Thermodesulfovibrio sp. N1 contig00023, whole genome shotgun sequence (26623 bp)
Overview 1 RT 1: 20949-26043 bp Neighborhood of RT #1 [20949, 26043] TIGR03986 RVT-CRISPR Cas_Cas1 Cas2_I_II_III Feature: gene Location: 20949-21269 bp Feature: gene Location: 21223-23055 bp Ori: ODA44134.1 Feature: domain Description: TIGR03986 Location: 21250-22957 bp Feature: domain Description: TIGR03986 Location: 2 12 50-2 2 957 bp Feature: gene Location: 23072-25615 bp Ori: ODA44135.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 24008-24566 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 4008-2 4566 bp Feature: domain Description: Cas_Cas1 Location: 24659-25490 bp Feature: domain Description: Cas_Cas1 Location: 2 4659-2 5490 bp Feature: gene Location: 25599-25892 bp Ori: ODA44136.1 Feature: domain Description: Cas2_I_II_III Location: 25632-25845 bp Feature: domain Description: Cas2 _I_II_III Location: 2 5632 -2 5845 bp Feature: gene Location: 25912-26043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03986 (CRISPR-associated protein), RVT-CRISPR, Cas_Cas1 (pfam01867), Cas2_I_II_III (cl11442)